Parental gene:

FXN, ENSDNOG00000024066

Aliases:None
Description:frataxin [Source:HGNC Symbol;Acc:3951]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_5179:4023..19608(+)


>ENSDNOG00000024066
GACTTGAACCTCCGCTGCCTCGACCAGATTCTGAATGTCAAAAAGCAAAGTGTCCATTTGATGAATTTGAAAAAAATGGG
AACTTTGGGTGATAGCTCTCTAGATGAGACAACCTATGAAAGACTGGCAGAGGAAACACTGGATTCCTTAGCAGAGTTTT
TTGAAGACCTTGCAGATAAATCTTGCACGTTTGAGGATTATGATGTTTCATTTGGGAGTGGTGTTTTAACAATTAAACTG
GGTGGCAATCTGGGAACCTACGTGATCAACAAGCAAACCCCAAACAGGCAAATCTGGTTATCTTCTCCATCCAGNNNNNN
NNNNNNNTATGATTGGACTGGGAAAAACTGGGTGTACTCCCACGACGGCGTCTCCCTCCATGAACTGCTGACTGCAGAAC
TGACTGCAGCTCTGAAAACCAAATTGGACTTATCTTCCTTGGCCTATTCTGGAAAAGACACTTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 2 .14 RPM
SRP012922_cerebellum 4 .81 RPM
SRP012922_heart 4 .64 RPM
SRP012922_kidney 4 .65 RPM
SRP012922_liver 1 .55 RPM
SRP012922_lung 5 .04 RPM
SRP012922_quadricep_muscle 3 .46 RPM
SRP012922_spleen 6 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006915 ortholog_one2one 1 retrogene
retro_amel_1496,
Choloepus hoffmanni ENSCHOG00000005107 ortholog_one2one 2 retrogenes
retro_chof_349, retro_chof_94,
Callithrix jacchus ENSCJAG00000001695 ortholog_one2one 4 retrogenes
retro_cjac_1562, retro_cjac_1927, retro_cjac_3939, retro_cjac_813,
Equus caballus ENSECAG00000019174 ortholog_one2one 1 retrogene
retro_ecab_311,
Homo sapiens ENSG00000165060 ortholog_one2one 2 retrogenes
retro_hsap_1447, retro_hsap_4311,
Gorilla gorilla ENSGGOG00000007636 ortholog_one2one 3 retrogenes
retro_ggor_1112, retro_ggor_2203, retro_ggor_2881,
Macaca mulatta ENSMMUG00000000357 ortholog_one2many 2 retrogenes
retro_mmul_2038, retro_mmul_826,
Mustela putorius furo ENSMPUG00000009619 ortholog_one2one 2 retrogenes
retro_mputfur_501, retro_mputfur_803,
Mus musculus ENSMUSG00000059363 ortholog_one2one 2 retrogenes
retro_mmus_1571, retro_mmus_3058,
Otolemur garnettii ENSOGAG00000031105 ortholog_one2many 2 retrogenes
retro_ogar_1865, retro_ogar_476,
Rattus norvegicus ENSRNOG00000015213 ortholog_one2one 1 retrogene
retro_rnor_2276,
Tursiops truncatus ENSTTRG00000010336 ortholog_one2one 4 retrogenes
retro_ttru_1281, retro_ttru_175, retro_ttru_546, retro_ttru_831,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_307 58.33 61.04
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_dnov_2204 51.15 82.47
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_dnov_2317 65.31 61.69
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000024066 retrocopies