Parental gene:

PPIA, ENSFCAG00000009159

Aliases:PPIA, MT-ND1, MTND1, NADH1, ND1, cypA
Description:Peptidyl-prolyl cis-trans isomerase A [Source:UniProtKB/Swiss-Prot;Acc:Q8HXS3]
Organism:Cat (Felis catus)
Coordinates:A2:62533021..62534357(+)


>ENSFCAG00000009159
GGCAGGCGTGGTGAAGTAACGCTCCGTCTTGTCTTACAGCTGTTTGCAGACAAAGTTCCCAAGACAGCAGAGAATTTTCG
TGCTCTCAGCACTGGGGAGAAAGGATTTGGTTACAAAGGTTCCTGCTTTCACAGGATTATCCCGGGATTTATGTGCCAGG
GTGGTGACTTCACACGCCATAATGGCACTGGAGGCAAGTCCATCTACGGGGAGAAGTTTGACGACGAGAATTTCATCCTG
AAGCACACAGGTCCTGGCATCCTGTCCATGGCGAACGCCGGACCCAACACGAATGGTTCCCAGTTTTTCATCTGCACCGC
CAAGACCGAGTGGTTGGATGGCAAGCACGTGGTGTTTGGCATGGTGAAGGAAGGCATGAACATCGTGGAAGCCATGGAGC
GCTTTGGGTCCCGGAACGGCAAGACCAGCAAGAAAATCACCATTGCTGACTGTGGACAAATCTAA

Library Parental gene expression (RPM)
SRP017611_liver 71 .07 RPM
SRP017611_kidney 193 .34 RPM
SRP017611_brain 129 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017784 ortholog_one2one 30 retrogenes
retro_amel_1032, retro_amel_1036, retro_amel_1141, retro_amel_1259, retro_amel_1264, retro_amel_1440, retro_amel_1516, retro_amel_1520, retro_amel_1524, retro_amel_1687, retro_amel_1713, retro_amel_1731, retro_amel_1786, retro_amel_1862, retro_amel_266, retro_amel_365, retro_amel_398, retro_amel_528, retro_amel_537, retro_amel_555, retro_amel_621, retro_amel_656, retro_amel_692, retro_amel_707, retro_amel_721, retro_amel_76, retro_amel_763, retro_amel_793, retro_amel_812, retro_amel_984,
Choloepus hoffmanni ENSCHOG00000011597 possible_ortholog 12 retrogenes
retro_chof_1071, retro_chof_1276, retro_chof_1317, retro_chof_1335, retro_chof_1876, retro_chof_1955, retro_chof_1959, retro_chof_2687, retro_chof_336, retro_chof_632, retro_chof_652, retro_chof_929,
Macropus eugenii ENSMEUG00000002016 possible_ortholog 20 retrogenes
retro_meug_1024, retro_meug_1055, retro_meug_1089, retro_meug_1133, retro_meug_1269, retro_meug_1391, retro_meug_1576, retro_meug_1746, retro_meug_1880, retro_meug_1975, retro_meug_2013, retro_meug_2037, retro_meug_260, retro_meug_297, retro_meug_301, retro_meug_437, retro_meug_478, retro_meug_510, retro_meug_713, retro_meug_73,
Monodelphis domestica ENSMODG00000016089 possible_ortholog 9 retrogenes
retro_mdom_1373, retro_mdom_1524, retro_mdom_1856, retro_mdom_1884, retro_mdom_215, retro_mdom_272, retro_mdom_29, retro_mdom_730, retro_mdom_85,
Mustela putorius furo ENSMPUG00000018190 ortholog_one2one 2 retrogenes
retro_mputfur_101, retro_mputfur_22,
Sorex araneus ENSSARG00000007250 ortholog_one2one 1 retrogene
retro_sara_484,
Sarcophilus harrisii ENSSHAG00000017062 possible_ortholog 3 retrogenes
retro_shar_164, retro_shar_383, retro_shar_750,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_12 83.10 92.21
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_fcat_133 59.56 88.31
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_fcat_372 68.61 88.31
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_fcat_504 77.40 94.16
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_fcat_531 71.33 92.21
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_fcat_676 77.03 94.81
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_fcat_684 78.33 77.27
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_fcat_827 81.16 88.96
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_fcat_1066 84.03 93.51
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_fcat_1146 81.94 93.51
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_fcat_1324 71.71 97.40
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_fcat_1348 95.36 98.05
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_fcat_1517 74.51 65.58
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_fcat_1710 78.29 97.40
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_fcat_1733 77.33 97.40
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_fcat_1739 68.97 92.21
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_fcat_1914 82.64 92.21
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_fcat_1928 76.32 73.38
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSFCAG00000009159 retrocopies