RetrogeneDB ID: | retro_sara_484 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_223274:13298..13712(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000007250 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 51.05 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | LFADKVPKTAENFRALSTGEKGFGYKCSCIHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHT |
LFAD.V.KTAEN..AL.TG.KGFGYK.S...R.....MC.......H.G........EK.D.ENFIL... | |
Retrocopy | LFADQVLKTAENVLALRTGKKGFGYK*SYLPRVAL*YMC----LIHHKGPKASXXXKEKHDGENFILMPS |
Parental | GPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIS--DC |
.P.IL.M.N.G.N.NG..F.ICT.K.EW....HV.F..VKEGMN...A.E.FG.R..KTS.....S..DC | |
Retrocopy | -PCILYMENVGYNPNGPKFLICTTKMEWVHD*HVAFCEVKEGMNSMTATECFGLRYSKTSQAFMDS*TDC |
Parental | GQV |
GQV | |
Retrocopy | GQV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |