Parental gene:

UBE2E1, ENSFCAG00000024719

Aliases:None
Description:ubiquitin-conjugating enzyme E2E 1 [Source:HGNC Symbol;Acc:12477]
Organism:Cat (Felis catus)
Coordinates:C2:139196999..139280106(+)


>ENSFCAG00000024719
ATGCAAACCGAGAAAGAAACAAACACCCCCAAGAAGAAGGAGAGTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTC
TACCAGCGCCAAGAGGATTCAGAAGGAACTGGCAGACATCACTTTAGACCCTCCACCTAACTGCAGTGCTGGTCCCAAAG
GCGATAACATCTATGAATGGAGATCAACCATTCTAGGACCTCCAGGATCCGTGTATGAGGGGGGTGTATTCTTCCTTGAT
ATCACTTTTACACCTGAATACCCCTTCAAGCCTCCAAAAGTCACATTTCGGACAAGAATCTATCACTGTAATATTAACAG
CCAAGGAGTTATTTGCTTGGACATATTAAAAGATAATTGGAGTCCAGCACTAACCATTTCTAAAGTTCTTCTTTCTATCT
GCTCCCTTCTTACAGACTGTAATCCTGCTGACCCTTTGGTGGGAAGTATTGCCACTCAGTATATGACCAACAGAGCAGAA
CATGACAGAATGGCCAGACAGTGGACCAAGAGATACGCTACATAA

Library Parental gene expression (RPM)
SRP017611_liver 23 .86 RPM
SRP017611_kidney 38 .34 RPM
SRP017611_brain 64 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003515 ortholog_one2one 2 retrogenes
retro_amel_1117, retro_amel_483,
Ciona intestinalis ENSCING00000006860 ortholog_one2many 1 retrogene
retro_cint_33,
Cavia porcellus ENSCPOG00000002251 ortholog_one2many 2 retrogenes
retro_cpor_1036, retro_cpor_52,
Felis catus ENSFCAG00000007748 within_species_paralog 2 retrogenes
retro_fcat_1582, retro_fcat_913,
Felis catus ENSFCAG00000008008 other_paralog 1 retrogene
retro_fcat_369,
Felis catus ENSFCAG00000024918 other_paralog 2 retrogenes
retro_fcat_1106, retro_fcat_785,
Macropus eugenii ENSMEUG00000014517 ortholog_one2one 1 retrogene
retro_meug_2089,
Mus musculus ENSMUSG00000021774 ortholog_one2one 3 retrogenes
retro_mmus_2493, retro_mmus_2600, retro_mmus_537,
Oryctolagus cuniculus ENSOCUG00000006026 ortholog_one2one 2 retrogenes
retro_ocun_134, retro_ocun_243,
Rattus norvegicus ENSRNOG00000008794 ortholog_one2one 3 retrogenes
retro_rnor_1632, retro_rnor_2291, retro_rnor_2343,
Sarcophilus harrisii ENSSHAG00000001416 ortholog_one2one 1 retrogene
retro_shar_712,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_623 81.14 99.43
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Download FASTA sequences of all ENSFCAG00000024719 retrocopies