Parental gene: | UFM1, ENSG00000120686 |
| Aliases: | UFM1, BM-002, C13orf20 |
| Description: | ubiquitin-fold modifier 1 [Source:HGNC Symbol;Acc:20597] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 13:38923985..38937140(+) |
>ENSG00000120686
ATGTCGAAGGTTTCCTTTAAGATCACGCTGACGTCGGACCCACGGCTGCCGTACAAAGTACTCAGTGTTCCTGAAAGTAC
ACCTTTCACAGCAGTCTTAAAGTTTGCAGCAGAAGAATTTAAAGTTCCTGCTGCAACAAGTGCAATTATTACCAATGATG
GAATAGGAATAAATCCTGCACAGACTGCTGGAAATGTTTTTCTAAAACATGGTTCAGAACTGCGGATTATTCCTAGAGAT
CGTGTTGGAAGTTGTTAA
ATGTCGAAGGTTTCCTTTAAGATCACGCTGACGTCGGACCCACGGCTGCCGTACAAAGTACTCAGTGTTCCTGAAAGTAC
ACCTTTCACAGCAGTCTTAAAGTTTGCAGCAGAAGAATTTAAAGTTCCTGCTGCAACAAGTGCAATTATTACCAATGATG
GAATAGGAATAAATCCTGCACAGACTGCTGGAAATGTTTTTCTAAAACATGGTTCAGAACTGCGGATTATTCCTAGAGAT
CGTGTTGGAAGTTGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 68 .69 RPM |
| bodymap2_lung | 105 .36 RPM |
| bodymap2_breast | 109 .67 RPM |
| bodymap2_adipose | 98 .24 RPM |
| bodymap2_adrenal | 100 .98 RPM |
| bodymap2_skeletal_muscle | 28 .79 RPM |
| bodymap2_thyroid | 107 .38 RPM |
| bodymap2_prostate | 87 .28 RPM |
| bodymap2_colon | 74 .69 RPM |
| bodymap2_testis | 80 .24 RPM |
| bodymap2_brain | 97 .96 RPM |
| bodymap2_heart | 38 .51 RPM |
| bodymap2_white_blood_cells | 75 .31 RPM |
| bodymap2_lymph_node | 96 .63 RPM |
| bodymap2_ovary | 104 .11 RPM |
| bodymap2_kidney | 117 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000006026 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017903 | ortholog_one2one | 4 retrogenes | |
| Equus caballus | ENSECAG00000014564 | ortholog_one2one | 3 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000008471 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026214 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000001660 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000008048 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014990 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000027746 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002556 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007023 | ortholog_one2one | 6 retrogenes | |
| Pongo abelii | ENSPPYG00000005293 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000040645 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000038176 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000021299 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000016449 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000011105 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000015482 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1825 | 89.23 | 76.47 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_2177 | 76.39 | 87.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_4098 | 83.82 | 64.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_4767 | 64.18 | 78.82 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000120686 retrocopies