Parental gene: | CRLF3, ENSG00000176390 |
| Aliases: | CRLF3, CREME-9, CREME9, CRLM9, CYTOR4, FRWS, p48.2 |
| Description: | cytokine receptor-like factor 3 [Source:HGNC Symbol;Acc:17177] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 17:29096405..29151794(-) |
>ENSG00000176390
ATGAGGGGGGCGATGGAGCTGGAGCCTGAGCTGCTGTTGCAGGAGGCCCGCGAGAACGTGGAGGCAGCGCAGAGCTACCG
GCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGTGAGGCGCGGAGGCAGATCAAAGAAAGTGCATCACAGACAAGGGATG
TTCTCAAACAGCATTTTAATGATTTAAAGGGAACCCTTGGAAAGCTCCTGGATGAGCGATTGGTGACCCTTTTGCAAGAG
GTGGACACCATTGAACAGGAGACCATTAAACCACTAGATGACTGCCAGAAGCTCATAGAACACGGAGTCAACACTGCAGA
GGACTTAGTCCGAGAAGGTGAAATCGCCATGCTTGGTGGTGTGGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAA
AGGCCTCGCACATTCAGTTGGACAGCTTACCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGAT
GACTCAATTCTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATAGAAGA
ACTAATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGATGACTTTACAGCCCAAGATTACAGGCTCC
AGTTTCGTAAATGTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAATTCATAGTATTGCACATAGAC
CCCAACGTTGATTACCAGTTCAGAGTCTGCGCCCGAGGAGATGGCCGACAGGAGTGGAGTCCTTGGAGTGTCCCCCAGAT
AGGTCATTCCACATTGGTGCCTCATGAGTGGACAGCTGGTTTTGAGGGGTACAGTCTGAGCAGTCGAAGAAATATAGCAC
TTCGGAACGATTCTGAATCATCGGGTGTTCTCTACTCCAGAGCTCCGACTTATTTCTGTGGGCAGACATTAACATTCAGA
GTTGAAACTGTGGGACAGCCAGACAGAAGAGATAGCATAGGAGTGTGTGCAGAAAAACAGGATGGATATGACTCTCTGCA
GCGGGATCAAGCTGTGTGCATTAGTACAAATGGTGCAGTTTTTGTCAATGGAAAAGAAATGACAAATCAGTTACCCGCAG
TTACTTCTGGGTCCACTGTCACGTTTGACATTGAAGCCGTGACTCTAGGAACCACCAGTAATAATGAAGGTGGACACTTC
AAGCTTCGAGTAACTATAAGTTCAAATAATAGAGAAGTGGTTTTTGACTGGTTACTTGATCAGTCTTGTGGTTCTCTTTA
CTTTGGATGCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAG
ATGAGGGGGGCGATGGAGCTGGAGCCTGAGCTGCTGTTGCAGGAGGCCCGCGAGAACGTGGAGGCAGCGCAGAGCTACCG
GCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGTGAGGCGCGGAGGCAGATCAAAGAAAGTGCATCACAGACAAGGGATG
TTCTCAAACAGCATTTTAATGATTTAAAGGGAACCCTTGGAAAGCTCCTGGATGAGCGATTGGTGACCCTTTTGCAAGAG
GTGGACACCATTGAACAGGAGACCATTAAACCACTAGATGACTGCCAGAAGCTCATAGAACACGGAGTCAACACTGCAGA
GGACTTAGTCCGAGAAGGTGAAATCGCCATGCTTGGTGGTGTGGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAA
AGGCCTCGCACATTCAGTTGGACAGCTTACCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGAT
GACTCAATTCTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATAGAAGA
ACTAATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGATGACTTTACAGCCCAAGATTACAGGCTCC
AGTTTCGTAAATGTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAATTCATAGTATTGCACATAGAC
CCCAACGTTGATTACCAGTTCAGAGTCTGCGCCCGAGGAGATGGCCGACAGGAGTGGAGTCCTTGGAGTGTCCCCCAGAT
AGGTCATTCCACATTGGTGCCTCATGAGTGGACAGCTGGTTTTGAGGGGTACAGTCTGAGCAGTCGAAGAAATATAGCAC
TTCGGAACGATTCTGAATCATCGGGTGTTCTCTACTCCAGAGCTCCGACTTATTTCTGTGGGCAGACATTAACATTCAGA
GTTGAAACTGTGGGACAGCCAGACAGAAGAGATAGCATAGGAGTGTGTGCAGAAAAACAGGATGGATATGACTCTCTGCA
GCGGGATCAAGCTGTGTGCATTAGTACAAATGGTGCAGTTTTTGTCAATGGAAAAGAAATGACAAATCAGTTACCCGCAG
TTACTTCTGGGTCCACTGTCACGTTTGACATTGAAGCCGTGACTCTAGGAACCACCAGTAATAATGAAGGTGGACACTTC
AAGCTTCGAGTAACTATAAGTTCAAATAATAGAGAAGTGGTTTTTGACTGGTTACTTGATCAGTCTTGTGGTTCTCTTTA
CTTTGGATGCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 5 .68 RPM |
| bodymap2_lung | 18 .86 RPM |
| bodymap2_breast | 13 .97 RPM |
| bodymap2_adipose | 17 .63 RPM |
| bodymap2_adrenal | 44 .73 RPM |
| bodymap2_skeletal_muscle | 4 .91 RPM |
| bodymap2_thyroid | 9 .08 RPM |
| bodymap2_prostate | 16 .82 RPM |
| bodymap2_colon | 13 .05 RPM |
| bodymap2_testis | 33 .82 RPM |
| bodymap2_brain | 11 .98 RPM |
| bodymap2_heart | 7 .00 RPM |
| bodymap2_white_blood_cells | 185 .42 RPM |
| bodymap2_lymph_node | 58 .13 RPM |
| bodymap2_ovary | 23 .04 RPM |
| bodymap2_kidney | 14 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014163 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005002 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000009069 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000017561 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005850 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000008142 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000008963 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2121 | 64.47 | 50.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_2133 | 81.63 | 66.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_3360 | 79.41 | 91.86 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000176390 retrocopies