Parental gene: | CRLF3, ENSMMUG00000009069 |
| Aliases: | None |
| Description: | cytokine receptor-like factor 3 [Source:RefSeq peptide;Acc:NP_001244548] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 16:27000102..27279087(-) |
>ENSMMUG00000009069
ATGAGGGGGGCGATGGAGCTGGAGCCTGAGCTGCTGCTGCAGGAGGCCCGCGAGAATGTGGAGGCAGCGCAGAGCTACCG
GCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGGGAGGCGCGGAGGCAGATCAAAGAAAGTGCATCACAGACAAGAGATG
TTCTCAAACAGCATTTTAATGATTTAAAGGGAACCCTTGGAAAGCTCCTGGATGAGCGATTGGTGACCCTTTTGCAAGAG
GTGGACACCATTGAACAGGAGACCATTAAACCACTAGATGACTGCCAGAAGCTCATAGAACACGGAGTCAACACTGCAGA
AGACTTAGTCCGAGAAGGTGAGATTGCCATGCTTGGTGGTGTGGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAA
AGGCCTCGCACATTCAGTTGGACAGCTTACCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGAT
GACTCAATTCTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATAGAAGA
ACTAATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGACGACTTTACAGCCCAAGATTACAGGCTCC
AGTTTCGTAAATGTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAATTCATAGTATTGCACATAGAC
CCCAACGTTGATTATCAGTTCAGAGTCTGTGCCCGAGGAGATGGCCGACAGGAGTGGAGTCCTTGGAGTGTTCCCCAAAT
AGGTCATTCCACATTGGTGCCTCATGAGTGGACAGCTGGTTTTGAGGGGTACAGTCTGAGCAGTCGAAGAAATATAGCAC
TCCGGAATGATTCTGAATCATCAGGTGTTCTCTACTCCAGAGCTCCGACTTATTTCTGTGGACAGACATTAACATTCAGG
CAACTGGTTGAAACTGTGGGACAGCCAGACAGGAGAGACAGCATAGGAGTGTGTGCGGAAAAACAGGACGGATATGACTC
TCTGCAGCGGGACCAAGCTGTGTGCATTAGTACAAATGGTGCAGTTTTTGTCAATGGAAAAGAAATGACGAATCAGTTAC
CCGCAGTTACCTCTGGGTCCACTGTCACATTTGACATTGAAGCCGTGACTCTAGGAACCTGCAATAATAATGAAGGTGGA
CACTTCAAGCTTCGAGTAACTATAAGTTCAAATAACAGAGAAGTGGTTTTTGATTGGTTACTTGATCAGTCATGTGGTTC
TCTTTACTTTGGATGCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAG
ATGAGGGGGGCGATGGAGCTGGAGCCTGAGCTGCTGCTGCAGGAGGCCCGCGAGAATGTGGAGGCAGCGCAGAGCTACCG
GCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGGGAGGCGCGGAGGCAGATCAAAGAAAGTGCATCACAGACAAGAGATG
TTCTCAAACAGCATTTTAATGATTTAAAGGGAACCCTTGGAAAGCTCCTGGATGAGCGATTGGTGACCCTTTTGCAAGAG
GTGGACACCATTGAACAGGAGACCATTAAACCACTAGATGACTGCCAGAAGCTCATAGAACACGGAGTCAACACTGCAGA
AGACTTAGTCCGAGAAGGTGAGATTGCCATGCTTGGTGGTGTGGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAA
AGGCCTCGCACATTCAGTTGGACAGCTTACCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGAT
GACTCAATTCTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATAGAAGA
ACTAATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGACGACTTTACAGCCCAAGATTACAGGCTCC
AGTTTCGTAAATGTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAATTCATAGTATTGCACATAGAC
CCCAACGTTGATTATCAGTTCAGAGTCTGTGCCCGAGGAGATGGCCGACAGGAGTGGAGTCCTTGGAGTGTTCCCCAAAT
AGGTCATTCCACATTGGTGCCTCATGAGTGGACAGCTGGTTTTGAGGGGTACAGTCTGAGCAGTCGAAGAAATATAGCAC
TCCGGAATGATTCTGAATCATCAGGTGTTCTCTACTCCAGAGCTCCGACTTATTTCTGTGGACAGACATTAACATTCAGG
CAACTGGTTGAAACTGTGGGACAGCCAGACAGGAGAGACAGCATAGGAGTGTGTGCGGAAAAACAGGACGGATATGACTC
TCTGCAGCGGGACCAAGCTGTGTGCATTAGTACAAATGGTGCAGTTTTTGTCAATGGAAAAGAAATGACGAATCAGTTAC
CCGCAGTTACCTCTGGGTCCACTGTCACATTTGACATTGAAGCCGTGACTCTAGGAACCTGCAATAATAATGAAGGTGGA
CACTTCAAGCTTCGAGTAACTATAAGTTCAAATAACAGAGAAGTGGTTTTTGATTGGTTACTTGATCAGTCATGTGGTTC
TCTTTACTTTGGATGCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 28 .72 RPM |
| SRP007412_brain | 33 .05 RPM |
| SRP007412_cerebellum | 20 .34 RPM |
| SRP007412_heart | 5 .89 RPM |
| SRP007412_kidney | 5 .52 RPM |
| SRP007412_liver | 3 .64 RPM |
| SRP007412_testis | 9 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014163 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000017897 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000025986 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000176390 | ortholog_one2many | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005002 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000017561 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005850 | ortholog_one2many | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000008142 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000008963 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000012342 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_998 | 66.67 | 50.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1002 | 78.52 | 66.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000009069 retrocopies