Parental gene: | CRLF3, ENSPTRG00000008963 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:26256692..26300201(+) |
>ENSPTRG00000008963
ATGAGGGGGGCGATGGAGCTGGAGCCTGAGCTGCTGCTGCAGGAGGCCCGCGAGAACGTGGAGGCAGCGCAGAGCTACCG
GCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGGGAGGCGCGGAGGCAGATCAAAGAAAGTGCATCACAGACAAGGGATG
TTCTCAAACAGCATTTTAATGATTTAAAGGGAACCCTTGGAAAGCTCCTGGATGAGCGATTGGTGACCCTTTTGCAAGAG
GTGGACACCATTGAACAGGAGACCATTAAACCACTAGATGACTGCCAGAAGCTCATAGAACACGGAGTCAACACTGCAGA
GGACTTAGTCCGAGAAGGTGAAATCGCCATGCTTGGTGGTGTGGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAA
AGGCCTCGCACATTCAGTTGGACAGCTTACCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGAT
GACTCAATTCTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATAGAAGA
ACTAATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGACGACTTTACAGCCCAAGATTACAGGCTCC
AGTTTCGTAAATGTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAATTCATAGTATTGCACATAGAC
CCCAACGTTGATTACCAGTTCAGAGTCTGCGCCCGAGGAGATGGCCGACAGGAGTGGAGTCCTTGGAGTGTCCCCCAGAT
AGGTCATTCCACATTGGTGCCTCATGAGTGGACAGCTGGTTTTGAGGGGTACAGTCTGAGCAGTCGAAGAAATATAGCAC
TCCGGAACGATTCTGAATCATCGGGTGTTCTCTACTCCAGAGCTCCGACTTATTTCTGTGGGCAGACATTAACATTCAGA
GTTGAAACTGTGGGACAGCCAGACAGAAGAGACAGCATAGGAGTGTGTGCAGAAAAACAGGATGGATATGACTCTCTGCA
GCGGGATCAAGCTGTGTGCATTAGTACAAATGGTGCAGTTTTTGTCAATGGAAAAGAAATGACAAATCAGTTACCCGCAG
TTACTTCTGGGTCCACTGTCACGTTTGACATTGAAGCCGTGACTCTAGGAACCACCAGTAATAATGAAGGTGGACACTTC
AAGCTTCGAGTAACTATAAGTTCAAATAATAGAGAAGTGGTTTTTGACTGGTTACTTGATCAGTCTTGTGGTTCTCTTTA
CTTTGGATGCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAG
ATGAGGGGGGCGATGGAGCTGGAGCCTGAGCTGCTGCTGCAGGAGGCCCGCGAGAACGTGGAGGCAGCGCAGAGCTACCG
GCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGGGAGGCGCGGAGGCAGATCAAAGAAAGTGCATCACAGACAAGGGATG
TTCTCAAACAGCATTTTAATGATTTAAAGGGAACCCTTGGAAAGCTCCTGGATGAGCGATTGGTGACCCTTTTGCAAGAG
GTGGACACCATTGAACAGGAGACCATTAAACCACTAGATGACTGCCAGAAGCTCATAGAACACGGAGTCAACACTGCAGA
GGACTTAGTCCGAGAAGGTGAAATCGCCATGCTTGGTGGTGTGGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAA
AGGCCTCGCACATTCAGTTGGACAGCTTACCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGAT
GACTCAATTCTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATAGAAGA
ACTAATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGACGACTTTACAGCCCAAGATTACAGGCTCC
AGTTTCGTAAATGTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAATTCATAGTATTGCACATAGAC
CCCAACGTTGATTACCAGTTCAGAGTCTGCGCCCGAGGAGATGGCCGACAGGAGTGGAGTCCTTGGAGTGTCCCCCAGAT
AGGTCATTCCACATTGGTGCCTCATGAGTGGACAGCTGGTTTTGAGGGGTACAGTCTGAGCAGTCGAAGAAATATAGCAC
TCCGGAACGATTCTGAATCATCGGGTGTTCTCTACTCCAGAGCTCCGACTTATTTCTGTGGGCAGACATTAACATTCAGA
GTTGAAACTGTGGGACAGCCAGACAGAAGAGACAGCATAGGAGTGTGTGCAGAAAAACAGGATGGATATGACTCTCTGCA
GCGGGATCAAGCTGTGTGCATTAGTACAAATGGTGCAGTTTTTGTCAATGGAAAAGAAATGACAAATCAGTTACCCGCAG
TTACTTCTGGGTCCACTGTCACGTTTGACATTGAAGCCGTGACTCTAGGAACCACCAGTAATAATGAAGGTGGACACTTC
AAGCTTCGAGTAACTATAAGTTCAAATAATAGAGAAGTGGTTTTTGACTGGTTACTTGATCAGTCTTGTGGTTCTCTTTA
CTTTGGATGCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 18 .59 RPM |
| SRP007412_cerebellum | 25 .09 RPM |
| SRP007412_heart | 5 .33 RPM |
| SRP007412_kidney | 6 .77 RPM |
| SRP007412_liver | 4 .62 RPM |
| SRP007412_testis | 25 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014163 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000176390 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005002 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000009069 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000017561 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005850 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000008142 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1560 | 82.65 | 66.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2175 | 79.66 | 91.86 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000008963 retrocopies