Parental gene:

CRLF3, ENSPTRG00000008963

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:26256692..26300201(+)


>ENSPTRG00000008963
ATGAGGGGGGCGATGGAGCTGGAGCCTGAGCTGCTGCTGCAGGAGGCCCGCGAGAACGTGGAGGCAGCGCAGAGCTACCG
GCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGGGAGGCGCGGAGGCAGATCAAAGAAAGTGCATCACAGACAAGGGATG
TTCTCAAACAGCATTTTAATGATTTAAAGGGAACCCTTGGAAAGCTCCTGGATGAGCGATTGGTGACCCTTTTGCAAGAG
GTGGACACCATTGAACAGGAGACCATTAAACCACTAGATGACTGCCAGAAGCTCATAGAACACGGAGTCAACACTGCAGA
GGACTTAGTCCGAGAAGGTGAAATCGCCATGCTTGGTGGTGTGGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAA
AGGCCTCGCACATTCAGTTGGACAGCTTACCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGAT
GACTCAATTCTTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATAGAAGA
ACTAATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGACGACTTTACAGCCCAAGATTACAGGCTCC
AGTTTCGTAAATGTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAATTCATAGTATTGCACATAGAC
CCCAACGTTGATTACCAGTTCAGAGTCTGCGCCCGAGGAGATGGCCGACAGGAGTGGAGTCCTTGGAGTGTCCCCCAGAT
AGGTCATTCCACATTGGTGCCTCATGAGTGGACAGCTGGTTTTGAGGGGTACAGTCTGAGCAGTCGAAGAAATATAGCAC
TCCGGAACGATTCTGAATCATCGGGTGTTCTCTACTCCAGAGCTCCGACTTATTTCTGTGGGCAGACATTAACATTCAGA
GTTGAAACTGTGGGACAGCCAGACAGAAGAGACAGCATAGGAGTGTGTGCAGAAAAACAGGATGGATATGACTCTCTGCA
GCGGGATCAAGCTGTGTGCATTAGTACAAATGGTGCAGTTTTTGTCAATGGAAAAGAAATGACAAATCAGTTACCCGCAG
TTACTTCTGGGTCCACTGTCACGTTTGACATTGAAGCCGTGACTCTAGGAACCACCAGTAATAATGAAGGTGGACACTTC
AAGCTTCGAGTAACTATAAGTTCAAATAATAGAGAAGTGGTTTTTGACTGGTTACTTGATCAGTCTTGTGGTTCTCTTTA
CTTTGGATGCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 18 .59 RPM
SRP007412_cerebellum 25 .09 RPM
SRP007412_heart 5 .33 RPM
SRP007412_kidney 6 .77 RPM
SRP007412_liver 4 .62 RPM
SRP007412_testis 25 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014163 ortholog_one2one 1 retrogene
retro_cjac_1183,
Homo sapiens ENSG00000176390 ortholog_one2one 3 retrogenes
retro_hsap_2121, retro_hsap_2133, retro_hsap_3360,
Gorilla gorilla ENSGGOG00000005002 ortholog_one2one 3 retrogenes
retro_ggor_1644, retro_ggor_1649, retro_ggor_2278,
Macaca mulatta ENSMMUG00000009069 ortholog_one2many 2 retrogenes
retro_mmul_1002, retro_mmul_998,
Mus musculus ENSMUSG00000017561 ortholog_one2one 1 retrogene
retro_mmus_368,
Nomascus leucogenys ENSNLEG00000005850 ortholog_one2one 4 retrogenes
retro_nleu_1957, retro_nleu_2534, retro_nleu_2899, retro_nleu_2900,
Pongo abelii ENSPPYG00000008142 ortholog_one2one 3 retrogenes
retro_pabe_1925, retro_pabe_1984, retro_pabe_2672,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1560 82.65 66.52
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2. retro_ptro_2175 79.66 91.86
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Download FASTA sequences of all ENSPTRG00000008963 retrocopies