Parental gene: | CMC1, ENSG00000187118 |
| Aliases: | None |
| Description: | COX assembly mitochondrial protein 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28783] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 3:28283074..28366633(+) |
>ENSG00000187118
ATGGCGCTCGACCCCGCAGACCAGCATCTCAGACATGTCGAAAAAGATGTTTTGATCCCTAAAATAATGAGAGAAAAGGC
CAAAGAGAGGTGTTCTGAACAAGTTCAAGATTTTACCAAATGTTGCAAGAACTCTGGAGTTCTTATGGTAGTAAAATGCC
GGAAAGAAAATTCTGCATTGAAAGAATGTCTAACTGCTTACTATAATGATCCAGCCTTTTATGAAGAATGCAAAATGGAA
TACCTGAAGGAAAGGGAAGAATTCAGAAAAACTGGAATTCCTACAAAGAAAAGGCTACAGAAGCTTCCAACAAGCATGTA
G
ATGGCGCTCGACCCCGCAGACCAGCATCTCAGACATGTCGAAAAAGATGTTTTGATCCCTAAAATAATGAGAGAAAAGGC
CAAAGAGAGGTGTTCTGAACAAGTTCAAGATTTTACCAAATGTTGCAAGAACTCTGGAGTTCTTATGGTAGTAAAATGCC
GGAAAGAAAATTCTGCATTGAAAGAATGTCTAACTGCTTACTATAATGATCCAGCCTTTTATGAAGAATGCAAAATGGAA
TACCTGAAGGAAAGGGAAGAATTCAGAAAAACTGGAATTCCTACAAAGAAAAGGCTACAGAAGCTTCCAACAAGCATGTA
G
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 10 .98 RPM |
| bodymap2_lung | 17 .14 RPM |
| bodymap2_breast | 11 .48 RPM |
| bodymap2_adipose | 6 .04 RPM |
| bodymap2_adrenal | 19 .73 RPM |
| bodymap2_skeletal_muscle | 3 .06 RPM |
| bodymap2_thyroid | 7 .12 RPM |
| bodymap2_prostate | 9 .47 RPM |
| bodymap2_colon | 11 .08 RPM |
| bodymap2_testis | 20 .15 RPM |
| bodymap2_brain | 7 .76 RPM |
| bodymap2_heart | 11 .72 RPM |
| bodymap2_white_blood_cells | 33 .71 RPM |
| bodymap2_lymph_node | 26 .09 RPM |
| bodymap2_ovary | 9 .54 RPM |
| bodymap2_kidney | 18 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000004272 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000018923 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000012406 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000011702 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000044 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004066 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000012793 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000009474 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014054 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000014706 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000010149 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000001629 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002573 | ortholog_one2one | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000011371 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_984 | 66.30 | 86.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1372 | 83.84 | 85.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1764 | 75.28 | 78.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_3229 | 75.25 | 87.61 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000187118 retrocopies