Parental gene: | CMC1, ENSGGOG00000012406 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 3:29078982..29146150(+) |
>ENSGGOG00000012406
AGAGTAAACAGTAGCACCAAACTGTCTTCAGGAGCAAACCAGCATCTCAGACATGTCGAAAAAGATGTTTTGATCCCTAA
AATAATGAGAGAAAAGGCCAAAGAGAGGTGTTCTGAACAAGTTCAAGATTTTACCAAATGTTGCAAGAACTCTGGAGTTC
TTATGGTAGTAAAATGCCGGAAAGAAAATTCTGCACTGAAAGAATGTCTAACTGCTTACTATAATGATCCAGCCTTTTAT
GAAGAATGCAAAATGGAATACCTGAAGGAAAGGGAAGAATTCAGAAAAACTGGAATTCCTACAAAGAAAAGGCTACAGAA
GCTTCCAACAAGCATGTAG
AGAGTAAACAGTAGCACCAAACTGTCTTCAGGAGCAAACCAGCATCTCAGACATGTCGAAAAAGATGTTTTGATCCCTAA
AATAATGAGAGAAAAGGCCAAAGAGAGGTGTTCTGAACAAGTTCAAGATTTTACCAAATGTTGCAAGAACTCTGGAGTTC
TTATGGTAGTAAAATGCCGGAAAGAAAATTCTGCACTGAAAGAATGTCTAACTGCTTACTATAATGATCCAGCCTTTTAT
GAAGAATGCAAAATGGAATACCTGAAGGAAAGGGAAGAATTCAGAAAAACTGGAATTCCTACAAAGAAAAGGCTACAGAA
GCTTCCAACAAGCATGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 2 .59 RPM |
| SRP007412_cerebellum | 1 .34 RPM |
| SRP007412_heart | 2 .66 RPM |
| SRP007412_kidney | 7 .97 RPM |
| SRP007412_liver | 7 .36 RPM |
| SRP007412_testis | 7 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000004272 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000018923 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000187118 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000011702 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000044 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004066 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000012793 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000009474 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014054 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000014706 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000010149 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000001629 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002573 | ortholog_one2one | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000011371 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_786 | 69.57 | 82.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1067 | 84.85 | 86.61 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2196 | 73.27 | 88.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2245 | 73.03 | 79.46 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000012406 retrocopies