Parental gene:

RPS2, ENSOGAG00000010098

Aliases:None
Description:ribosomal protein S2 [Source:HGNC Symbol;Acc:10404]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873563.1:8171604..8173730(-)


>ENSOGAG00000010098
ATGGCGGATGACGCCGGTGCAGCGGGAGGGCCTGGAGGCCCTGGGGGCCCTGGAATGGGAGGCCGTGGTGGTTTCCGTGG
AGGCTTCGGCAGCGGCATTCGAGGCCGGGGTCGCGGCCGTGGTCGTGGTCGGGGCCGAGGCCGTGGAGCTCGCGGAGGCA
AGGCCGAGGACAAAGAGTGGATGCCCGTCACCAAGCTGGGCCGCCTGGTCAAGGACATGAAGATCAAATCCCTGGAGGAG
ATCTATCTTTTCTCTCTGCCCATTAAGGAATCTGAGATCATTGATTTTTTCTTGGGGGCATCTCTCAAGGATGAGGTTTT
GAAGATTATGCCAGTGCAAAAACAAACCCGTGCTGGCCAGCGGACCAGGTTCAAGGCGTTTGTTGCCATTGGGGACTACA
ATGGCCACGTCGGCCTGGGTGTTAAGTGTTCCAAGGAAGTAGCCACTGCCATCCGAGGGGCCATCATCCTGGCCAAGCTC
TCTATTGTCCCAGTGCGGAGAGGTTACTGGGGGAATAAGATCGGCAAGCCTCACACTGTTCCTTGCAAGGTGACAGGCCG
TTGTGGCTCTGTGCTGGTACGTCTCATCCCTGCTCCTAGAGGAACTGGCATTGTCTCAGCACCTGTGCCTAAGAAACTGC
TAATGATGGCTGGGATCGATGACTGCTACACTTCAGCCAGGGGCTGCACTGCCACCCTGGGCAACTTTGCCAAGGCCACT
TTTGATGCCATTTCCAAGACCTATAGCTATCTCACTCCTGATCTCTGGAAAGAGACAGTGTTCACCAAGTCTCCTTACCA
AGAATTCACTGACCATCTTGTCAAGACCCACACCAGAGTCTCTGTGCAAAGGACCCAGGCTCCAGCTGTGGCTACAACAT
AG

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000002549 ortholog_one2many 1 retrogene
retro_acar_57,
Felis catus ENSFCAG00000029191 ortholog_one2many 6 retrogenes
retro_fcat_1245, retro_fcat_1328, retro_fcat_1606, retro_fcat_1610, retro_fcat_1737, retro_fcat_517,
Homo sapiens ENSG00000140988 ortholog_one2one 47 retrogenes
retro_hsap_1060, retro_hsap_136, retro_hsap_140, retro_hsap_141, retro_hsap_1443, retro_hsap_1444, retro_hsap_1457, retro_hsap_1463, retro_hsap_148, retro_hsap_1648, retro_hsap_1688, retro_hsap_1722, retro_hsap_1812, retro_hsap_1830, retro_hsap_1831, retro_hsap_1838, retro_hsap_1845, retro_hsap_1897, retro_hsap_1953, retro_hsap_1965, retro_hsap_1971, retro_hsap_2124, retro_hsap_2198, retro_hsap_2424, retro_hsap_244, retro_hsap_2483, retro_hsap_2486, retro_hsap_250, retro_hsap_282, retro_hsap_2871, retro_hsap_3035, retro_hsap_3097, retro_hsap_3106, retro_hsap_3182, retro_hsap_3211, retro_hsap_3369, retro_hsap_3464, retro_hsap_3584, retro_hsap_3779, retro_hsap_385, retro_hsap_4094, retro_hsap_4290, retro_hsap_435, retro_hsap_4811, retro_hsap_754, retro_hsap_761, retro_hsap_970,
Macropus eugenii ENSMEUG00000004508 possible_ortholog 2 retrogenes
retro_meug_156, retro_meug_2103,
Microcebus murinus ENSMICG00000012765 possible_ortholog 28 retrogenes
retro_mmur_1192, retro_mmur_1273, retro_mmur_1283, retro_mmur_1296, retro_mmur_1407, retro_mmur_1417, retro_mmur_1440, retro_mmur_153, retro_mmur_1613, retro_mmur_205, retro_mmur_210, retro_mmur_226, retro_mmur_230, retro_mmur_259, retro_mmur_266, retro_mmur_463, retro_mmur_672, retro_mmur_698, retro_mmur_742, retro_mmur_802, retro_mmur_824, retro_mmur_829, retro_mmur_875, retro_mmur_953, retro_mmur_966, retro_mmur_969, retro_mmur_981, retro_mmur_99,
Monodelphis domestica ENSMODG00000016077 possible_ortholog 1 retrogene
retro_mdom_536,
Sarcophilus harrisii ENSSHAG00000015213 possible_ortholog 5 retrogenes
retro_shar_186, retro_shar_288, retro_shar_456, retro_shar_525, retro_shar_783,
Tupaia belangeri ENSTBEG00000006726 possible_ortholog 30 retrogenes
retro_tbel_1023, retro_tbel_1059, retro_tbel_1105, retro_tbel_1179, retro_tbel_129, retro_tbel_1444, retro_tbel_1545, retro_tbel_1615, retro_tbel_1622, retro_tbel_1786, retro_tbel_1910, retro_tbel_2294, retro_tbel_2749, retro_tbel_2786, retro_tbel_2973, retro_tbel_3179, retro_tbel_3314, retro_tbel_3509, retro_tbel_3523, retro_tbel_3682, retro_tbel_3701, retro_tbel_392, retro_tbel_4373, retro_tbel_463, retro_tbel_4674, retro_tbel_481, retro_tbel_586, retro_tbel_603, retro_tbel_639, retro_tbel_647,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_794 67.22 59.73
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2. retro_ogar_1051 74.66 100.00
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3. retro_ogar_1120 90.18 93.52
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4. retro_ogar_1205 66.27 57.00
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5. retro_ogar_1557 93.18 60.07
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6. retro_ogar_1821 87.04 92.15
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7. retro_ogar_1835 78.45 100.00
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8. retro_ogar_1837 91.88 66.89
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9. retro_ogar_1851 68.24 58.02
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10. retro_ogar_2101 84.58 77.13
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11. retro_ogar_2164 88.10 100.00
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12. retro_ogar_2313 70.00 82.59
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13. retro_ogar_2648 63.29 95.22
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14. retro_ogar_2817 67.93 62.12
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15. retro_ogar_2842 77.58 75.09
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16. retro_ogar_2965 73.53 55.97
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17. retro_ogar_3109 72.34 63.82
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18. retro_ogar_3177 61.14 65.53
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19. retro_ogar_3180 65.71 70.65
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Download FASTA sequences of all ENSOGAG00000010098 retrocopies