Parental gene:

SRSF9, ENSOPRG00000004234

Aliases:None
Description:serine/arginine-rich splicing factor 9 [Source:HGNC Symbol;Acc:10791]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_1213:59295..68621(-)


>ENSOPRG00000004234
ATGTCGGGCTGGGTGGACGAGCGCTGCGGCGAGGGCGACGGGCGCATCTACGTGGGGAACCTGCCGACGAACGTGCGTGA
GAAGGACCTGGAGGACTTGTTTTACAAGTACGGCCGCATCCGCGAGATCGAGCTCAAGAACCGGCACGGCCTCGTGCCTT
TCGCCTTCGTGCGCTTCGAGGACCCGCGAGATGCTGAGGATGCAATTTATGGAAGGAATGGTTACGATTATGGCCAATGT
CGGCTTCGTGTGGAGTTCCCCAGGACTTATGGGAGTCGAGGTGGGTGGCCCCGTGGTGGGAGGACCGGACCACCTACAAG
AAGATCCGATTTCCGAGTTCTTGTTTCAGGACTTCCTCCATCAGGCAGCTGGCAGGACCTAAAAGATCATATGCGAGAAG
CTGGGGATGTCTGTTATGCAGATGTGCAGAAGGATGGAATGGGGATGGTTGAATATCTTAGAAAAGAAGATATGGAATAT
GCCCTGCGTAAGCTGGATGACACCAAGTTCCGCTCTCATGAGGGTGAAACTTCCTACATCCGAGTTTATCCTGAGAGAAG
CACCAGCTATGGCTATTCACGGTCCCGCTCCGGGTCTAGGGGTCGTGACTCTCCATACCAAAGCAGGGGTTCCCCACACT
ACTTCTCTCCTTTCAGATCCTACTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012792 ortholog_one2one 1 retrogene
retro_btau_837,
Choloepus hoffmanni ENSCHOG00000009241 ortholog_one2one 1 retrogene
retro_chof_1119,
Callithrix jacchus ENSCJAG00000001187 ortholog_one2one 1 retrogene
retro_cjac_442,
Dasypus novemcinctus ENSDNOG00000012598 ortholog_one2one 2 retrogenes
retro_dnov_1555, retro_dnov_2648,
Homo sapiens ENSG00000111786 ortholog_one2one 1 retrogene
retro_hsap_2530,
Macaca mulatta ENSMMUG00000016494 ortholog_one2one 1 retrogene
retro_mmul_2154,
Nomascus leucogenys ENSNLEG00000015661 ortholog_one2one 1 retrogene
retro_nleu_1931,
Otolemur garnettii ENSOGAG00000003852 ortholog_one2one 1 retrogene
retro_ogar_2328,
Ochotona princeps ENSOPRG00000001234 within_species_paralog 2 retrogenes
retro_opri_335, retro_opri_625,
Ochotona princeps ENSOPRG00000006006 other_paralog 3 retrogenes
retro_opri_1037, retro_opri_158, retro_opri_545,
Pongo abelii ENSPPYG00000005031 ortholog_one2many 1 retrogene
retro_pabe_119,
Sarcophilus harrisii ENSSHAG00000005685 ortholog_one2one 1 retrogene
retro_shar_598,
Sus scrofa ENSSSCG00000009906 ortholog_one2one 1 retrogene
retro_sscr_745,
Tupaia belangeri ENSTBEG00000008499 ortholog_one2one 1 retrogene
retro_tbel_2602,
Tarsius syrichta ENSTSYG00000006848 ortholog_one2one 4 retrogenes
retro_tsyr_1432, retro_tsyr_1648, retro_tsyr_585, retro_tsyr_891,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_878 65.10 85.07
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Download FASTA sequences of all ENSOPRG00000004234 retrocopies