Parental gene: | METTL5, ENSPPYG00000012916 |
| Aliases: | None |
| Description: | methyltransferase like 5 [Source:HGNC Symbol;Acc:25006] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 2b:59877906..59893019(-) |
>ENSPPYG00000012916
ATGAAGAAAGTAAGGCTTAAGGAACTAGAGAGTCGCCTGCAACAAGTGGATGGATTCGAAAAGCCCAAGCTACTTCTAGA
ACAGTATCCTACCAGGCCGCACATTGCAGCATGTATGCTCTATACAATCCATAACACTTATGATGACATTGAAAATAAAG
TCGTTGCAGATCTAGGATGTGGTTGTGGAGTACTTAGCATCGGAACTGCAATGTTAGGAGCAGGGTTGTGTGTTGGATTT
GACATAGATGAAGACGCATTGGAAATATTTAATAGAAATGCAGAAGAGTTTGGGTTAACAAATATTGACATGGTTCAATG
TGATGTGTGCTTATTATCTAACAGAATGTCCAAGTCATTCGATACAGTAATTATGAATCCTCCCTTTGGGACCAAAAATA
ATAAAGGGACAGATATGGCTTTTCTAAAGACTGCTTTGGAAATGGCAAGAACAGCAGTATATTCCTTACACAAATCCTCA
ACTAGAGAACATGTTCAAAAGAAAGCTGCAGAATGGAAAATCAAGATAGATATTATAGCAGAGCTTCGATATGACCTGCC
AGCATCATACAAGTTTCACAAAAAGAAATCAGTGGACATTGAAGTGGACCTAATTCGGTTTTCCTTTTAA
ATGAAGAAAGTAAGGCTTAAGGAACTAGAGAGTCGCCTGCAACAAGTGGATGGATTCGAAAAGCCCAAGCTACTTCTAGA
ACAGTATCCTACCAGGCCGCACATTGCAGCATGTATGCTCTATACAATCCATAACACTTATGATGACATTGAAAATAAAG
TCGTTGCAGATCTAGGATGTGGTTGTGGAGTACTTAGCATCGGAACTGCAATGTTAGGAGCAGGGTTGTGTGTTGGATTT
GACATAGATGAAGACGCATTGGAAATATTTAATAGAAATGCAGAAGAGTTTGGGTTAACAAATATTGACATGGTTCAATG
TGATGTGTGCTTATTATCTAACAGAATGTCCAAGTCATTCGATACAGTAATTATGAATCCTCCCTTTGGGACCAAAAATA
ATAAAGGGACAGATATGGCTTTTCTAAAGACTGCTTTGGAAATGGCAAGAACAGCAGTATATTCCTTACACAAATCCTCA
ACTAGAGAACATGTTCAAAAGAAAGCTGCAGAATGGAAAATCAAGATAGATATTATAGCAGAGCTTCGATATGACCTGCC
AGCATCATACAAGTTTCACAAAAAGAAATCAGTGGACATTGAAGTGGACCTAATTCGGTTTTCCTTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .42 RPM |
| SRP007412_cerebellum | 2 .80 RPM |
| SRP007412_heart | 13 .03 RPM |
| SRP007412_kidney | 5 .40 RPM |
| SRP007412_liver | 2 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000003343 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013460 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000138382 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000022484 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000018044 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000023054 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005018 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010405 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012621 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2281 | 77.50 | 57.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2523 | 61.21 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000012916 retrocopies