RetrogeneDB ID: | retro_lafr_1213 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_9:30765401..30765713(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | METTL5 | ||
Ensembl ID: | ENSLAFG00000018044 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.71 % |
Parental protein coverage: | 50.24 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | KKLKLKELESRLQQVDGFEKPKLLLEQYPTRPHIAACMLYTIHNTYDDIENKVVADLGCGCGVLSIGTAM |
KKLK.KELES.LQQVDGF.KPKLLLEQY.TR.HIAACM.YTIHNTYD..ENKVVADLGCGCGV.S.G.AM | |
Retrocopy | KKLKFKELESCLQQVDGFKKPKLLLEQYLTRSHIAACMRYTIHNTYDG-ENKVVADLGCGCGVPSMGNAM |
Parental | LGAGLCVGFDIDEDALEIFNRNVEEFELTNVDMVQ |
L.AGL.VGFDIDEDALEIFNR.VEEFELTNVD.VQ | |
Retrocopy | LAAGLYVGFDIDEDALEIFNRYVEEFELTNVDVVQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Canis familiaris | ENSCAFG00000012438 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000006777 | 2 retrocopies | |
Cavia porcellus | ENSCPOG00000003343 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000013460 | 2 retrocopies | |
Homo sapiens | ENSG00000138382 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000022484 | 2 retrocopies | |
Loxodonta africana | ENSLAFG00000018044 | 2 retrocopies |
retro_lafr_1213 , retro_lafr_864,
|
Macaca mulatta | ENSMMUG00000023054 | 3 retrocopies | |
Nomascus leucogenys | ENSNLEG00000005018 | 4 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000010405 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000012916 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000012621 | 3 retrocopies | |
Tursiops truncatus | ENSTTRG00000002154 | 2 retrocopies |