RetrogeneDB ID: | retro_nleu_1919 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397316.1:3561195..3561487(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | METTL5 | ||
Ensembl ID: | ENSNLEG00000005018 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 61. % |
Parental protein coverage: | 75.38 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | MKKIRLKELESRLQQVDGFEKPKL-LLEQYPTRPHIAACMLYTIHNTYDDIENKVVADLGCGCGVLNIGT |
.KK.RLK.L...LQ.VDGF..P...LLE.YP.R..I.AC.LYTIH...DDIE.KVVADL..G..VL.I.. | |
Retrocopy | VKKLRLKGLQCQLQ*VDGFK*PGH<LLE*YPARGYI*ACVLYTIHYIWDDIEIKVVADLEHGGRVLSIRA |
Parental | AMLGAGL-CVGFDIDEDALEIFNRNAEEFE |
...GAGL..V..DIDEDAL.IFNRN.EEF. | |
Retrocopy | TTVGAGL<VVVLDIDEDALKIFNRNVEEFD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Cavia porcellus | ENSCPOG00000003343 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000013460 | 2 retrocopies | |
Homo sapiens | ENSG00000138382 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000022484 | 2 retrocopies | |
Loxodonta africana | ENSLAFG00000018044 | 2 retrocopies | |
Macaca mulatta | ENSMMUG00000023054 | 3 retrocopies | |
Nomascus leucogenys | ENSNLEG00000005018 | 4 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000010405 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000012916 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000012621 | 3 retrocopies |