Parental gene:

RNF7, ENSPPYG00000014167

Aliases:None
Description:ring finger protein 7 [Source:HGNC Symbol;Acc:10070]
Organism:Orangutan (Pongo abelii)
Coordinates:3:144277934..144286577(+)


>ENSPPYG00000014167
ATGGCCGACGTGGAAGACGGAGAGGAAACCTGCGCCCTGGCCTCTCACTCCGGGAGCTCAGGCTCCAAGTCGGGAGGCGA
CAAGATGTTCTCCCTTAAGAAGTGGAACGCGGTGGCCATGTGGAGCTGGGACGTGGAGTGCGATACGTGCGCCATCTGCA
GGGTCCAGGTGATGGATGCCTGTCTTAGATGTCAAGCTGAAAACAAACAAGAGGACTGTGTTGTGGTCTGGGGAGAATGT
AATCATTCCTTTCACAACTGCTGCATGTCCCTGTGGGTGAAACAGAACAATCGCTGCCCTCTCTGCCAGCAGGACTGGGT
AGTCCAAAGAATCGGCAAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 43 .85 RPM
SRP007412_cerebellum 31 .01 RPM
SRP007412_heart 20 .86 RPM
SRP007412_kidney 34 .04 RPM
SRP007412_liver 25 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007694 ortholog_one2one 1 retrogene
retro_cfam_1802,
Choloepus hoffmanni ENSCHOG00000010742 ortholog_one2many 3 retrogenes
retro_chof_2513, retro_chof_45, retro_chof_518,
Callithrix jacchus ENSCJAG00000001991 ortholog_one2one 2 retrogenes
retro_cjac_1391, retro_cjac_3943,
Dasypus novemcinctus ENSDNOG00000005961 ortholog_one2one 3 retrogenes
retro_dnov_1587, retro_dnov_2383, retro_dnov_294,
Homo sapiens ENSG00000114125 ortholog_one2one 1 retrogene
retro_hsap_2790,
Gorilla gorilla ENSGGOG00000001829 ortholog_one2one 1 retrogene
retro_ggor_1942,
Microcebus murinus ENSMICG00000001353 ortholog_one2one 1 retrogene
retro_mmur_1140,
Macaca mulatta ENSMMUG00000006648 ortholog_one2one 2 retrogenes
retro_mmul_1223, retro_mmul_1440,
Monodelphis domestica ENSMODG00000021232 ortholog_one2many 1 retrogene
retro_mdom_201,
Mus musculus ENSMUSG00000051234 ortholog_one2many 3 retrogenes
retro_mmus_1066, retro_mmus_2450, retro_mmus_3,
Nomascus leucogenys ENSNLEG00000004646 ortholog_one2one 3 retrogenes
retro_nleu_2038, retro_nleu_2972, retro_nleu_687,
Otolemur garnettii ENSOGAG00000008659 ortholog_one2one 1 retrogene
retro_ogar_2433,
Pongo abelii ENSPPYG00000011861 within_species_paralog 2 retrogenes
retro_pabe_1986, retro_pabe_1987,
Pan troglodytes ENSPTRG00000039248 ortholog_one2many 1 retrogene
retro_ptro_51,
Rattus norvegicus ENSRNOG00000011663 ortholog_one2one 5 retrogenes
retro_rnor_1858, retro_rnor_1859, retro_rnor_2262, retro_rnor_517, retro_rnor_624,
Ictidomys tridecemlineatus ENSSTOG00000014964 ortholog_one2one 3 retrogenes
retro_itri_1245, retro_itri_566, retro_itri_567,
Tupaia belangeri ENSTBEG00000002917 ortholog_one2one 2 retrogenes
retro_tbel_2202, retro_tbel_4027,
Tarsius syrichta ENSTSYG00000007778 ortholog_one2one 5 retrogenes
retro_tsyr_1222, retro_tsyr_1285, retro_tsyr_1410, retro_tsyr_2117, retro_tsyr_434,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1446 67.86 97.35
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2. retro_pabe_2228 88.50 100.00
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Download FASTA sequences of all ENSPPYG00000014167 retrocopies