Parental gene:

RNF7, ENSPTRG00000039248

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:3:145295179..145302128(+)


>ENSPTRG00000039248
ATGGCCGACGTGGAAGACGGAGAGGAAACCTGCGCCCTGGCCTCTCACTCCGGGAGCTCAGGCTCCAAGTCGGGAGGCGA
CAAGATGTTCTCCCTCAAGAAGTGGAACGCGGTGGCCATGTGGAGCTGGGACGTGGAGTGCGATACGTGCGCCATCTGCA
GGGTCCAGGTGATGGATGCCTGTCTTAGATGTCAAGCTGAAAACAAACAAGAGGACTGTGTTGTGGTCTGGGGAGAATGT
AATCATTCCTTCCACAACTGCTGCATGTCCCTGTGGGTGAAACAGAACAATCGCTGCCCTCTCTGCCAGCAGGACTGGGT
GGTCCAAAGAATCGGCAAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .79 RPM
SRP007412_cerebellum 1 .43 RPM
SRP007412_heart 1 .54 RPM
SRP007412_kidney 2 .72 RPM
SRP007412_liver 1 .87 RPM
SRP007412_testis 1 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007694 ortholog_one2many 1 retrogene
retro_cfam_1802,
Choloepus hoffmanni ENSCHOG00000010742 ortholog_many2many 3 retrogenes
retro_chof_2513, retro_chof_45, retro_chof_518,
Callithrix jacchus ENSCJAG00000001991 ortholog_one2many 2 retrogenes
retro_cjac_1391, retro_cjac_3943,
Dasypus novemcinctus ENSDNOG00000005961 ortholog_one2many 3 retrogenes
retro_dnov_1587, retro_dnov_2383, retro_dnov_294,
Homo sapiens ENSG00000114125 ortholog_one2many 1 retrogene
retro_hsap_2790,
Gorilla gorilla ENSGGOG00000001829 ortholog_one2many 1 retrogene
retro_ggor_1942,
Microcebus murinus ENSMICG00000001353 ortholog_one2many 1 retrogene
retro_mmur_1140,
Macaca mulatta ENSMMUG00000006648 ortholog_one2many 2 retrogenes
retro_mmul_1223, retro_mmul_1440,
Monodelphis domestica ENSMODG00000021232 ortholog_many2many 1 retrogene
retro_mdom_201,
Mus musculus ENSMUSG00000051234 ortholog_many2many 3 retrogenes
retro_mmus_1066, retro_mmus_2450, retro_mmus_3,
Nomascus leucogenys ENSNLEG00000004646 ortholog_one2many 3 retrogenes
retro_nleu_2038, retro_nleu_2972, retro_nleu_687,
Otolemur garnettii ENSOGAG00000008659 ortholog_one2many 1 retrogene
retro_ogar_2433,
Pongo abelii ENSPPYG00000014167 ortholog_one2many 2 retrogenes
retro_pabe_1446, retro_pabe_2228,
Pan troglodytes ENSPTRG00000014417 within_species_paralog 1 retrogene
retro_ptro_1550,
Rattus norvegicus ENSRNOG00000011663 ortholog_one2many 5 retrogenes
retro_rnor_1858, retro_rnor_1859, retro_rnor_2262, retro_rnor_517, retro_rnor_624,
Ictidomys tridecemlineatus ENSSTOG00000014964 ortholog_one2many 3 retrogenes
retro_itri_1245, retro_itri_566, retro_itri_567,
Tupaia belangeri ENSTBEG00000002917 ortholog_one2many 2 retrogenes
retro_tbel_2202, retro_tbel_4027,
Tarsius syrichta ENSTSYG00000007778 ortholog_one2many 5 retrogenes
retro_tsyr_1222, retro_tsyr_1285, retro_tsyr_1410, retro_tsyr_2117, retro_tsyr_434,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_51 100.00 100.00
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Download FASTA sequences of all ENSPTRG00000039248 retrocopies