Parental gene:

ENSPPYG00000029910

Aliases:None
Description:None
Organism:Orangutan (Pongo abelii)
Coordinates:10_random:33860035..33866703(-)


>ENSPPYG00000029910
ATGGCCAAGAACAAATTAAGAGGGCCGAAGTCCAGGAATGTATTTCACATAGCCAGTCAAAAAAACTTTAAGGCTAAAAA
CAAAGCAAAACCAGTTACCACTAATCTTAAGAAGATAAACATTATGAATGAGGAAAAAGTTAACAGAGTAAATAAAGCTT
TTGTAAATGTACAAAAGGAACTTGCACATTTCTCAAAAAGCACTTCACTTGAACCTCTGCAGAAAGAACTGATTCCTCAG
CAGCGTCATGAAAGCAAACCCGTTAATGTTGATGAAGCTACAAGATTAATGGCTCTGTTGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .33 RPM
SRP007412_cerebellum 3 .77 RPM
SRP007412_heart 5 .24 RPM
SRP007412_kidney 7 .96 RPM
SRP007412_liver 7 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002409 ortholog_one2many 2 retrogenes
retro_amel_1005, retro_amel_1049,
Bos taurus ENSBTAG00000032227 ortholog_many2many 2 retrogenes
retro_btau_158, retro_btau_7,
Callithrix jacchus ENSCJAG00000000379 ortholog_one2many 5 retrogenes
retro_cjac_1214, retro_cjac_1556, retro_cjac_1984, retro_cjac_2448, retro_cjac_2762,
Cavia porcellus ENSCPOG00000021965 ortholog_one2many 5 retrogenes
retro_cpor_201, retro_cpor_554, retro_cpor_765, retro_cpor_841, retro_cpor_962,
Felis catus ENSFCAG00000026366 ortholog_one2many 1 retrogene
retro_fcat_450,
Homo sapiens ENSG00000176731 ortholog_one2many 4 retrogenes
retro_hsap_2609, retro_hsap_3163, retro_hsap_3606, retro_hsap_52,
Gorilla gorilla ENSGGOG00000027464 ortholog_one2many 4 retrogenes
retro_ggor_1218, retro_ggor_1353, retro_ggor_1828, retro_ggor_2433,
Loxodonta africana ENSLAFG00000032612 ortholog_one2many 4 retrogenes
retro_lafr_1083, retro_lafr_1242, retro_lafr_911, retro_lafr_944,
Myotis lucifugus ENSMLUG00000006155 ortholog_one2many 1 retrogene
retro_mluc_1272,
Macaca mulatta ENSMMUG00000006381 ortholog_one2many 3 retrogenes
retro_mmul_1475, retro_mmul_2490, retro_mmul_537,
Mus musculus ENSMUSG00000078784 ortholog_many2many 3 retrogenes
retro_mmus_257, retro_mmus_2950, retro_mmus_3313,
Pan troglodytes ENSPTRG00000020385 ortholog_one2many 5 retrogenes
retro_ptro_1759, retro_ptro_2275, retro_ptro_2437, retro_ptro_2982, retro_ptro_471,
Rattus norvegicus ENSRNOG00000038902 ortholog_one2many 2 retrogenes
retro_rnor_2600, retro_rnor_496,
Sus scrofa ENSSSCG00000006144 ortholog_one2many 2 retrogenes
retro_sscr_342, retro_sscr_96,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2345 67.03 89.00
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2. retro_pabe_2630 81.72 92.00
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3. retro_pabe_3633 74.68 78.00
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Download FASTA sequences of all ENSPPYG00000029910 retrocopies