Parental gene:

ENSSHAG00000009178

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL864789.1:513008..521438(+)


>ENSSHAG00000009178
ATGGAAAATACTGAAATTACAATAGATTCAAAGTCCTCCAAAAGTTCAGGATTAAAGATCTTCCATGGTAGCAAGTCTGT
GGAATCTGGACTGTCATCAGACAGCTATAAAATGGATTATCCAGAAATGGGGTTATGTGTAATCATAAATAATAAAAATT
TTCACCCAAACACTGGCATGTCTTTTCGGTCTGGGACTGATGTAGATGCAGCACATCTCAGGGATACATTCAAAAGCTTG
AAATATGAAGTCAGAAATAAAAATGATTTGACATGTAAAGAAATAATTGAATTACTTTACAATGTTTCTAAAGAAGATCA
CAGCCAAAGGAGCAGTTTTGTTTGTGTGATTCTAAGTCATGGTGAAGAAGGAATCATCTTTGGGACAGATGGATCTGTTG
AACTGAAAAGATTAACATATTTCTTTAAAGGGGATAAGTGTAAAAGTCTTACAGGAAAACCAAAGCTTTTTATCATTCAG
GCATGTAGAGGCACAGAGTTGGATTGTGGTATTGAGACAGATAGTGCCACTGATGATGTAACATGCCAGAAAATACCTGT
TGAGGCAGACTTCTTATATGCTTATTCTACAGCCCCAGGTTACTATTCTTGGAGAAATTCAAAGGATGGTTCATGGTTTA
TCCAGTCACTTTGTGCAGTGCTGAAACAGTATGCTTACAAGCTTGAAATCATGCAAATCCTTACCAGAGTCAATCGGAAG
GTTGCCACAGAGTTTGAATCTTACTCCTTAGATGCTACCTTCCATGCAAAGAAACAGGTGCCATGTATCATGTCCATGCT
TACTAAGGAACTATATTTTTTCCCCTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005740 ortholog_one2many 2 retrogenes
retro_cjac_2678, retro_cjac_3011,
Cavia porcellus ENSCPOG00000012511 ortholog_one2many 2 retrogenes
retro_cpor_1203, retro_cpor_1450,
Dasypus novemcinctus ENSDNOG00000013931 ortholog_many2many 1 retrogene
retro_dnov_1013,
Dipodomys ordii ENSDORG00000002554 ortholog_one2many 2 retrogenes
retro_dord_178, retro_dord_620,
Homo sapiens ENSG00000164305 ortholog_one2many 1 retrogene
retro_hsap_406,
Gorilla gorilla ENSGGOG00000025155 ortholog_one2many 1 retrogene
retro_ggor_402,
Microcebus murinus ENSMICG00000004809 ortholog_one2many 2 retrogenes
retro_mmur_1389, retro_mmur_691,
Macaca mulatta ENSMMUG00000012053 ortholog_many2many 1 retrogene
retro_mmul_114,
Nomascus leucogenys ENSNLEG00000010895 ortholog_one2many 1 retrogene
retro_nleu_1005,
Otolemur garnettii ENSOGAG00000005985 ortholog_one2many 2 retrogenes
retro_ogar_1756, retro_ogar_3263,
Pongo abelii ENSPPYG00000015236 ortholog_one2many 1 retrogene
retro_pabe_312,
Pan troglodytes ENSPTRG00000016640 ortholog_one2many 1 retrogene
retro_ptro_310,
Rattus norvegicus ENSRNOG00000010475 ortholog_many2many 1 retrogene
retro_rnor_2747,
Ictidomys tridecemlineatus ENSSTOG00000003865 ortholog_many2many 2 retrogenes
retro_itri_172, retro_itri_586,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_404 56.00 53.09
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSHAG00000009178 retrocopies