Parental gene:

RPS23, ENSSSCG00000014133

Aliases:None
Description:ribosomal protein S23 [Source:HGNC Symbol;Acc:10410]
Organism:Pig (Sus scrofa)
Coordinates:2:92675094..92676828(-)


>ENSSSCG00000014133
ATGGGCAAGTGTCGCGGTCTTCGTACTGCCAGGAAGCTCCGTAGCCACCGACGGGACCAGAAGTGGCACGATAAACAGTA
CAAGAAAGCCCATTTGGGCACAGCCCTGAAGGCCAACCCTTTCGGAGGCGCTTCTCATGCCAAGGGAATTGTGCTTGAAA
AAGTAGGGGTTGAAGCCAAACAGCCAAATTCTGCCATCAGGAAGTGTGTCAGGGTTCAGCTAATCAAGAATGGGAAAAAA
ATTACAGCCTTTGTACCCAATGATGGTTGTTTGAACTTCATTGAGGAAAATGATGAAGTTCTGGTTGCTGGATTTGGTCG
CAAAGGTCATGCTGTTGGTGACATTCCTGGAGTCCGCTTTAAGGTTGTCAAAGTAGCCAATGTCTCTCTTTTGGCCTTAT
ACAAAGGCAAGAAGGAGAGACCAAGATCATAA

Library Parental gene expression (RPM)
SRP014902_placenta 98 .75 RPM
SRP014902_testis 278 .37 RPM
SRP018856_adipose 615 .95 RPM
SRP018288_kidney 278 .18 RPM
SRP018288_lung 39 .92 RPM
SRP018288_liver 284 .48 RPM
SRP018288_heart 210 .75 RPM
SRP035408_liver 131 .01 RPM
SRP035408_brain 127 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013358 possible_ortholog 3 retrogenes
retro_btau_173, retro_btau_205, retro_btau_80,
Callithrix jacchus ENSCJAG00000011247 possible_ortholog 2 retrogenes
retro_cjac_126, retro_cjac_256,
Dipodomys ordii ENSDORG00000001813 possible_ortholog 2 retrogenes
retro_dord_187, retro_dord_93,
Homo sapiens ENSG00000186468 ortholog_one2one 6 retrogenes
retro_hsap_1778, retro_hsap_2940, retro_hsap_3107, retro_hsap_3287, retro_hsap_3989, retro_hsap_4697,
Gorilla gorilla ENSGGOG00000025014 ortholog_one2one 6 retrogenes
retro_ggor_1316, retro_ggor_2038, retro_ggor_2131, retro_ggor_2237, retro_ggor_2677, retro_ggor_286,
Macropus eugenii ENSMEUG00000012931 possible_ortholog 1 retrogene
retro_meug_811,
Macaca mulatta ENSMMUG00000003578 possible_ortholog 4 retrogenes
retro_mmul_1239, retro_mmul_1974, retro_mmul_2305, retro_mmul_852,
Monodelphis domestica ENSMODG00000020255 ortholog_one2one 3 retrogenes
retro_mdom_1518, retro_mdom_1612, retro_mdom_395,
Mustela putorius furo ENSMPUG00000008114 ortholog_one2one 1 retrogene
retro_mputfur_1298,
Nomascus leucogenys ENSNLEG00000013203 ortholog_one2one 3 retrogenes
retro_nleu_1353, retro_nleu_1909, retro_nleu_764,
Oryctolagus cuniculus ENSOCUG00000010363 possible_ortholog 2 retrogenes
retro_ocun_195, retro_ocun_95,
Pteropus vampyrus ENSPVAG00000002083 possible_ortholog 4 retrogenes
retro_pvam_1483, retro_pvam_782, retro_pvam_80, retro_pvam_922,
Rattus norvegicus ENSRNOG00000016580 possible_ortholog 12 retrogenes
retro_rnor_100, retro_rnor_1394, retro_rnor_149, retro_rnor_1691, retro_rnor_1941, retro_rnor_1959, retro_rnor_1982, retro_rnor_2119, retro_rnor_2182, retro_rnor_2492, retro_rnor_525, retro_rnor_559,
Sarcophilus harrisii ENSSHAG00000008347 possible_ortholog 2 retrogenes
retro_shar_257, retro_shar_348,
Vicugna pacos ENSVPAG00000009427 possible_ortholog 7 retrogenes
retro_vpac_195, retro_vpac_239, retro_vpac_393, retro_vpac_543, retro_vpac_56, retro_vpac_598, retro_vpac_81,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_92 96.50 100.00
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Download FASTA sequences of all ENSSSCG00000014133 retrocopies