RetrogeneDB ID: | retro_vpac_598 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | scaffold_6294:82820..83108(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS23 | ||
Ensembl ID: | ENSVPAG00000009427 | ||
Aliases: | None | ||
Description: | ribosomal protein S23 [Source:HGNC Symbol;Acc:10410] |
Percent Identity: | 90.72 % |
Parental protein coverage: | 55.75 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | LWLLPGRLLSFAQARGAGRMGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIV |
LWL.PG.LLSFA.ARGAGRMGKCRGLRTAR.LRSH.RDQK.HDKQYKKAHLGTALKANPFGGAS.AKGIV | |
Retrocopy | LWL-PGLLLSFALARGAGRMGKCRGLRTAR*LRSH*RDQKCHDKQYKKAHLGTALKANPFGGASYAKGIV |
Parental | LEKVGVEAKQPNSAIRKCVRVQLIKNG |
L.KVG.EAKQPNSAIRKCVRVQLIKNG | |
Retrocopy | LRKVGFEAKQPNSAIRKCVRVQLIKNG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |