Parental gene: | SRSF3, ENSTTRG00000013447 |
| Aliases: | None |
| Description: | serine/arginine-rich splicing factor 3 [Source:HGNC Symbol;Acc:10785] |
| Organism: | Dolphin (Tursiops truncatus) |
| Coordinates: | scaffold_103123:176223..180574(+) |
>ENSTTRG00000013447
ATGCATCGTGATTCCTGTCCGTTGGACTGTAAAGTTTATGTAGGTAATCTTGGAAACAATGGTAACAAGACTGAATTGGA
ACGAGCTTTTGGCTATTATGGACCACTCCGAAGTGTGTGGGTTGCTAGAAACCCTCCTGGCTTTGCTTTTGTTGAATTTG
AAGATCCTCGAGATGCAGCCGATGCTGTCCGAGAGCTAGATGGGAGAACACTATGTGGCTGCCGAGTAAGAGTGGAACTG
TCGAATGGTGAAAAGAGAAGTCGAAATCGTGGCCCACCTCCTTCTTGGGGTCGTCGCCCTCGAGATGATTATCGGAGGAG
GAGTCCTCCACCGCGCCGCAGATCTCCAAGACGGAGAAGCTTCTCCCGCAGCCGGAGCAGGTCCCTTTCTAGAGATAGGA
GAAGAGAGAGATCACTGTCCCGGGAGAGAAATCACAAGCCGTCCCGATCTTTCTCTAGGTCTCGTAGCCGATCTAGGTCA
AATGAAAGGAAATAG
ATGCATCGTGATTCCTGTCCGTTGGACTGTAAAGTTTATGTAGGTAATCTTGGAAACAATGGTAACAAGACTGAATTGGA
ACGAGCTTTTGGCTATTATGGACCACTCCGAAGTGTGTGGGTTGCTAGAAACCCTCCTGGCTTTGCTTTTGTTGAATTTG
AAGATCCTCGAGATGCAGCCGATGCTGTCCGAGAGCTAGATGGGAGAACACTATGTGGCTGCCGAGTAAGAGTGGAACTG
TCGAATGGTGAAAAGAGAAGTCGAAATCGTGGCCCACCTCCTTCTTGGGGTCGTCGCCCTCGAGATGATTATCGGAGGAG
GAGTCCTCCACCGCGCCGCAGATCTCCAAGACGGAGAAGCTTCTCCCGCAGCCGGAGCAGGTCCCTTTCTAGAGATAGGA
GAAGAGAGAGATCACTGTCCCGGGAGAGAAATCACAAGCCGTCCCGATCTTTCTCTAGGTCTCGTAGCCGATCTAGGTCA
AATGAAAGGAAATAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000040006 | ortholog_one2one | 5 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016062 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000112081 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000018193 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000004674 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000010671 | ortholog_one2many | 6 retrogenes | |
| Mustela putorius furo | ENSMPUG00000014215 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000071172 | ortholog_one2one | 9 retrogenes | |
| Otolemur garnettii | ENSOGAG00000000502 | possible_ortholog | 6 retrogenes | |
| Ochotona princeps | ENSOPRG00000006006 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000520 | ortholog_one2one | 11 retrogenes | |
| Sus scrofa | ENSSSCG00000001564 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014280 | ortholog_one2one | 5 retrogenes | |
| Tarsius syrichta | ENSTSYG00000013498 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000015410 | other_paralog | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000005481 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ttru_105 | 92.07 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ttru_610 | 86.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ttru_916 | 87.88 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ttru_1195 | 86.14 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ttru_1577 | 83.03 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ttru_1628 | 73.96 | 57.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ttru_1639 | 85.00 | 95.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ttru_1653 | 85.54 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ttru_1677 | 83.03 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_ttru_1731 | 86.14 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_ttru_1892 | 82.42 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTTRG00000013447 retrocopies