RetrogeneDB ID: | retro_ttru_1639 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_82217:0..470(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SRSF3 | ||
Ensembl ID: | ENSTTRG00000013447 | ||
Aliases: | None | ||
Description: | serine/arginine-rich splicing factor 3 [Source:HGNC Symbol;Acc:10785] |
Percent Identity: | 85. % |
Parental protein coverage: | 95.73 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | LDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRV- |
LDC.VYV.NLGN.GNKTE.ERA.GYYGPLRSVWVA.NPPGFA.VE.EDPRDAADAV.ELDGRTLCGC.V. | |
Retrocopy | LDCNVYVRNLGNSGNKTEFERALGYYGPLRSVWVAKNPPGFALVENEDPRDAADAV*ELDGRTLCGCQV< |
Parental | RVELSNGEKRSRNRG-PPPSWGRRPRDDYRRRSPPPRRRSPRRRSFSRSRSRSL-SRDRRRERSLSRERN |
RV.LSNGE.RSRN.G.PPPSWGRRPRDDYRRR.PPP...SPRRRSFSRSRSRSL.SR.RRRERSLS.ERN | |
Retrocopy | RVNLSNGERRSRNHG<PPPSWGRRPRDDYRRRNPPPHHTSPRRRSFSRSRSRSL>SRYRRRERSLSQERN |
Parental | HKPSRSFSRSRSRSRSNERK |
.KPSRSFSRS.SRSRSNERK | |
Retrocopy | RKPSRSFSRSPSRSRSNERK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |