RetrogeneDB ID: | retro_amel_1863 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194946.1:31186..31448(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SUMO3 | ||
Ensembl ID: | ENSAMEG00000002071 | ||
Aliases: | None | ||
Description: | small ubiquitin-like modifier 3 [Source:HGNC Symbol;Acc:11124] |
Percent Identity: | 63.74 % |
Parental protein coverage: | 90.72 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 3 |
Parental | AGTEKPQEGVKT-ENDHINLKVAGQDGSVVQF-KIKR-HTPLSKLMKAYCERQGLSMRQIRFRFDGQPIN |
A....P.EGVK...NDHI.L.VA.QDG.VVQF.KIKR.HT.LSK.MKAY...QGL.MR.IRF..D.QPI. | |
Retrocopy | AAGKQPKEGVKR<NNDHIQLEVAEQDGPVVQF>KIKR>HTILSKRMKAYY-KQGLLMR*IRF*CDRQPIS |
Parental | ETDTPAQLEMEDEDTIDVFQQ |
.TD..AQLEMED...I.VF.Q | |
Retrocopy | GTDSSAQLEMED*NIIHVF*Q |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |