RetrogeneDB ID: | retro_itri_116 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393879.1:151492..151822(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSTOG00000008319 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000010587 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.63 % |
Parental protein coverage: | 88.99 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SERKLEEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDT |
S..K..EGVKTENDHINLK..GQDGS.VQFKIKRHTPLSKLMKAY.ERQGLSMRQIRFRFDGQPINETDT | |
Retrocopy | SKEKPKEGVKTENDHINLKLVGQDGSMVQFKIKRHTPLSKLMKAYYERQGLSMRQIRFRFDGQPINETDT |
Parental | PAQLEMEDEDTIDVFQQQTGGMASRGT |
PAQLEME.EDTIDVFQ...GGMASRGT | |
Retrocopy | PAQLEMEVEDTIDVFQRRIGGMASRGT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |