RetrogeneDB ID: | retro_fcat_1947 | ||
Retrocopylocation | Organism: | Cat (Felis catus) | |
Coordinates: | X:107661692..107661873(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSFCAG00000026550 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.08 % |
Parental protein coverage: | 58.65 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | GSVVQFKI-KRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQ-LEMEDEDTIDVF |
GSV.Q.KI.K...PL.KLMKA.C.RQ.L.MR..R.RFDGQPIN..DTP.Q..EM..EDTID.F | |
Retrocopy | GSVIQLKI<K*QRPLNKLMKACCGRQNLPMR*TRCRFDGQPINGIDTPVQ<MEMTGEDTIDEF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP017611_brain | 0 .00 RPM | 11 .94 RPM |
SRP017611_kidney | 0 .00 RPM | 9 .38 RPM |
SRP017611_liver | 0 .00 RPM | 3 .03 RPM |