RetrogeneDB - Parental gene ENSSTOG00000024685 details

                            
>ENSSTOG00000024685
AGAGAACGTCGTAATAAAGAAGGAGTCAAGACTGAGAACAACGATCATATTAACTTGAAGGTGGCGGGGCAGGATGGTTC

TGTGGTGCAGTTTAAGATTAAGAGGCATACACCACTTAGTAAACTAATGAAAGCATATTGTGAACGACAGGGTTTGTCGA

TGAGGCAGATCAGATTCCGATTTGACGGGCAGCCAATTAATGAAACAGACACACCTGCACAGTTGGAAATGGAGGATGAA

GATACAATTGATGTGTTCCAGCAGCAGACAGGAGGTGTCTACTAA

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000002071	possible_ortholog	3 retrogenes	retro_amel_1388, retro_amel_1586, retro_amel_1863,
Bos taurus	ENSBTAG00000017321	possible_ortholog	3 retrogenes	retro_btau_1730, retro_btau_580, retro_btau_701,
Bos taurus	ENSBTAG00000030169	possible_ortholog	8 retrogenes	retro_btau_1047, retro_btau_1484, retro_btau_1804, retro_btau_260, retro_btau_344, retro_btau_489, retro_btau_582, retro_btau_895,
Choloepus hoffmanni	ENSCHOG00000010239	possible_ortholog	1 retrogene	retro_chof_2468,
Callithrix jacchus	ENSCJAG00000010529	possible_ortholog	20 retrogenes	retro_cjac_1110, retro_cjac_1128, retro_cjac_1525, retro_cjac_1752, retro_cjac_1938, retro_cjac_1957, retro_cjac_1993, retro_cjac_2460, retro_cjac_2481, retro_cjac_2616, retro_cjac_2651, retro_cjac_2886, retro_cjac_2899, retro_cjac_2985, retro_cjac_3088, retro_cjac_3137, retro_cjac_4123, retro_cjac_711, retro_cjac_771, retro_cjac_774,
Cavia porcellus	ENSCPOG00000025203	possible_ortholog	3 retrogenes	retro_cpor_328, retro_cpor_645, retro_cpor_963,
Felis catus	ENSFCAG00000026550	possible_ortholog	4 retrogenes	retro_fcat_1210, retro_fcat_1947, retro_fcat_823, retro_fcat_836,
Homo sapiens	ENSG00000184900	possible_ortholog	4 retrogenes	retro_hsap_1675, retro_hsap_1841, retro_hsap_3672, retro_hsap_4103,
Microcebus murinus	ENSMICG00000011011	possible_ortholog	2 retrogenes	retro_mmur_179, retro_mmur_41,
Myotis lucifugus	ENSMLUG00000025342	ortholog_one2many	4 retrogenes	retro_mluc_1502, retro_mluc_272, retro_mluc_340, retro_mluc_625,
Myotis lucifugus	ENSMLUG00000028601	possible_ortholog	2 retrogenes	retro_mluc_1321, retro_mluc_2494,
Macaca mulatta	ENSMMUG00000006760	possible_ortholog	3 retrogenes	retro_mmul_2131, retro_mmul_2215, retro_mmul_47,
Mustela putorius furo	ENSMPUG00000010234	possible_ortholog	1 retrogene	retro_mputfur_1504,
Mustela putorius furo	ENSMPUG00000013954	ortholog_one2one	9 retrogenes	retro_mputfur_1086, retro_mputfur_1403, retro_mputfur_1535, retro_mputfur_273, retro_mputfur_275, retro_mputfur_385, retro_mputfur_666, retro_mputfur_948, retro_mputfur_995,
Mus musculus	ENSMUSG00000020265	possible_ortholog	1 retrogene	retro_mmus_3548,
Nomascus leucogenys	ENSNLEG00000002351	possible_ortholog	9 retrogenes	retro_nleu_1084, retro_nleu_1253, retro_nleu_1736, retro_nleu_2052, retro_nleu_21, retro_nleu_2128, retro_nleu_3039, retro_nleu_523, retro_nleu_572,
Oryctolagus cuniculus	ENSOCUG00000021739	possible_ortholog	4 retrogenes	retro_ocun_1024, retro_ocun_1631, retro_ocun_1690, retro_ocun_321,
Otolemur garnettii	ENSOGAG00000004715	possible_ortholog	10 retrogenes	retro_ogar_1199, retro_ogar_1646, retro_ogar_1945, retro_ogar_2958, retro_ogar_328, retro_ogar_3469, retro_ogar_371, retro_ogar_419, retro_ogar_526, retro_ogar_967,
Rattus norvegicus	ENSRNOG00000003670	ortholog_one2one	2 retrogenes	retro_rnor_418, retro_rnor_67,
Rattus norvegicus	ENSRNOG00000038489	possible_ortholog	1 retrogene	retro_rnor_2158,
Sarcophilus harrisii	ENSSHAG00000002220	ortholog_one2one	20 retrogenes	retro_shar_152, retro_shar_201, retro_shar_232, retro_shar_259, retro_shar_308, retro_shar_319, retro_shar_361, retro_shar_374, retro_shar_398, retro_shar_461, retro_shar_477, retro_shar_487, retro_shar_505, retro_shar_545, retro_shar_546, retro_shar_575, retro_shar_673, retro_shar_680, retro_shar_789, retro_shar_810,
Sus scrofa	ENSSSCG00000024026	possible_ortholog	2 retrogenes	retro_sscr_1089, retro_sscr_320,
Ictidomys tridecemlineatus	ENSSTOG00000010587	within_species_paralog	2 retrogenes	retro_itri_116, retro_itri_1259,
Ictidomys tridecemlineatus	ENSSTOG00000025405	within_species_paralog	4 retrogenes	retro_itri_1193, retro_itri_1232, retro_itri_216, retro_itri_668,
Takifugu rubripes	ENSTRUG00000014892	possible_ortholog	1 retrogene	retro_trub_25,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_itri_79	81.72	98.94	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_itri_202	80.00	93.62	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_itri_264	89.29	59.57	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_itri_272	78.89	93.62	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_itri_921	79.49	81.91	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_itri_981	85.39	94.68	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_itri_983	76.34	98.94	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_itri_1017	61.11	73.40	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_itri_1123	68.48	97.87	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_itri_1355	60.47	90.43	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSSTOG00000024685 retrocopies

Parental gene:	ENSSTOG00000024685
Aliases:	None
Description:	None
Organism:	*Squirrel (Ictidomys tridecemlineatus)*
Coordinates:	JH393404.1:362629..484517(-)

Parental gene:

ENSSTOG00000024685