RetrogeneDB ID: | retro_amel_211 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192354.1:2074282..2074540(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TXN | ||
Ensembl ID: | ENSAMEG00000018017 | ||
Aliases: | None | ||
Description: | thioredoxin [Source:HGNC Symbol;Acc:12435] |
Percent Identity: | 64.77 % |
Parental protein coverage: | 80.95 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | AGDKLVVVDFSA-TWCGPCKMIKP-FFHSLSEKYSNVVFLEVDVDDCQDVAAECEVKCMPTFQF-FKKGQ |
AGDKLV.VDF...T.CGPCKMIKP.F..SL...............DC.DVA.ECE.KCMPTFQF.FKKGQ | |
Retrocopy | AGDKLVAVDFCS<TCCGPCKMIKPFFIPSLKSVPT*CSLKQM*MTDCRDVASECEGKCMPTFQF>FKKGQ |
Parental | KVGEFSGANKEKLEATIN |
KVG.FSG.NKEKLE..IN | |
Retrocopy | KVGGFSGVNKEKLEE*IN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |