RetrogeneDB ID: | retro_amel_95 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193544.1:219330..220260(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000019443 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000001332 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.1 % |
Parental protein coverage: | 75.38 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MVDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDRYGK |
MVDYYEVL.VQR.AS.EDIKKAYRK.ALKWHPDKNPENKEEAERKFK.VAEAYEVLS...KRDIYD.YG. | |
Retrocopy | MVDYYEVLEVQRYASPEDIKKAYRKVALKWHPDKNPENKEEAERKFKEVAEAYEVLSNNEKRDIYDKYGQ |
Parental | EGLNGGGGGGVHFDSPFEFGFTFRNPDEVFREFFGGRDPFSFDFFEDPFEDFFGSRRGPRGSRNRGTGSF |
EGLNG.G....HFD..FE.GF.FR.PD.VFRE.FG.RDPFSF.FFED..ED...S.R...GS..RGT.SF | |
Retrocopy | EGLNGRGRS--HFDDSFEYGFIFRKPDDVFREIFGERDPFSFHFFEDSLEDLLNSPRSSCGS--RGTRSF |
Parental | FSAFSGFPSFGGAFPSFDTGFTSFASPGHGGITSFSSTAFGGSGMGSFKSISTSTKMVNGRKITTKRIVD |
F......P.F...F.S.D.G.T...S.GH.G..SFSS.A...SGM....S...S.K.VN.R...T.RI.. | |
Retrocopy | FATSNKYPVF-ERFSSYDIGYTPYGSLGHEGLNSFSSLASDDSGMSNYISVTASGKIVNSRNTNTQRIIE |
Parental | NGEERVEVEENGQLKSLMINGVADENALLEECRRRGQS |
N..ER.EV...G.LKS..INGVADE....EEC..R..S | |
Retrocopy | NAQEREEVDDDGELKSFLINGVADEDGFVEECSWRRKS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |