RetrogeneDB ID: | retro_amel_685 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192569.1:633080..633764(+) | ||
Located in intron of: | ENSAMEG00000016164 | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000016205 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000001332 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.1 % |
Parental protein coverage: | 70.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MVDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDRYGK |
MVDYYEVLGV.R.AS...IK.AYRKLAL.WHPDKNPENKEEAER.FKQVA.AYEVLSDAKKRD.YD.YG. | |
Retrocopy | MVDYYEVLGVPRQASSKAIKEAYRKLALRWHPDKNPENKEEAERRFKQVAQAYEVLSDAKKRDVYDPYGE |
Parental | EGLNGGGGGGVHFDSPFEFGFTFRNPDEVFREFFGGRDPFSFDFFEDPFEDFFGSRRGPRGSRNRGTGSF |
.G...GGGGG.....PFE..FTFR.P.EVFRE.FG.RDPFS.DFF.DP.E...G.RR..RGSR.R.T.SF | |
Retrocopy | AGVEDGGGGG-PCREPFEYVFTFRDPAEVFRESFGDRDPFSSDFFGDPLESIVGGRRSSRGSRSRRTASF |
Parental | FSAFSGFPSFGGAFPSFDTGFTSFASPGH-GGITSFSSTAFGGSGMGSFKSISTSTKMVNGRKITTKRIV |
F.AFS.FP.FGG.F.SFDT.F.SF.S.G..GG..SFS....G..G...FKS.STST.MVNG.KITTKRI. | |
Retrocopy | F-AFSEFPAFGGGFSSFDTDFSSFGSLGE>GGLSSFSMSC-GSGGTCNFKSMSTSTEMVNGKKITTKRII |
Parental | DNGEERV-EVEENGQLKSLMING |
.NG.ERV..VEE.G.LKSL.ING | |
Retrocopy | ENGQERV<GVEEDGDLKSLVING |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |