RetrogeneDB ID: | retro_chof_2304 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_64685:4203..4584(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000009464 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.44 % |
Parental protein coverage: | 74.43 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | VGKIFDAPPALPRAARKALGTVNRATEKSVKT-NGPLKQKQPSFFAKKMTEKTVKAKSSVPASDDIYPEI |
VGKIFDAPPALPR..RK.LGTVN.ATE.SVKT....LKQKQP.FFAKK.T..TVKAK........IY.E. | |
Retrocopy | VGKIFDAPPALPRDFRKPLGTVNTATEESVKT<RNSLKQKQPIFFAKKLTDNTVKAKPQF--GPQIYTEK |
Parental | EKFFPFNPLDFESFDLPE-EHQIAHLPLNG-VPLMILEEERELEKLLE-LGPPSPVKMPSLMWES |
.K.FP.NPLDFES..LP....QIA.L.L.G...LMIL...RELE.LL...G..SPVK.PSLMWES | |
Retrocopy | *KLFPSNPLDFES--LPA*RAQIAYLNLSG<RALMILNKKRELENLLQ<AGQLSPVKIPSLMWES |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |