Parental gene: | PTTG1, ENSGGOG00000016937 |
| Aliases: | None |
| Description: | Securin [Source:UniProtKB/TrEMBL;Acc:G3RL88] |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 5:144509337..144518896(+) |
>ENSGGOG00000016937
ATGGCTACTCTGATCTATGTTGATAAGGAAAATGGAGAACCAGGCACCCGTGTGGCTGCTAAGGATGGGCTGAAGCTGGG
GTCTGCACCTTCAATCAAAGCCTTAGATGGGAGATCTCAAGTTTCAACACCACGTTTTGGCAAAACGTTCGATGCCCCAC
CAGCCTTACCTAAAGCTACCAGAAAGGCTTTGGGAACCGTCAACAGAGCTACAGAAAAGTCTGTAAAGACCAAGGGACCC
CTCAAACAAAAACAGCCAAGCTTTTCTGCCAAAAAGATGACTGAGAAGACTGTTAAAGCAAAAAGCTCTGTTCCTGCCTC
AGATGATGCCTATCCAGAAATAGAAAAATTCTTTCCCTTCAATCCTCTAGTAACAGACTTTGAGAGTTTTGACCTGCCTG
AAGAGCACCAGATTGCGCACCTCCCCTTGAGTGGAGTGCCTCTCATGATCCTTGACGAGGAGAGAGAGCTTGAAAAGCTG
TTTCAGCTGGGCCCCCCTTCACCTGTGAAGATGCCCTCTCCACCATGGGAATCCAATCTGTTGCAGTCTCCTTCAAGCAT
TCTGTCGACCCTGGATGTTGAATTGCCACCTGTTTGCTGTGACATAGATATTTAA
ATGGCTACTCTGATCTATGTTGATAAGGAAAATGGAGAACCAGGCACCCGTGTGGCTGCTAAGGATGGGCTGAAGCTGGG
GTCTGCACCTTCAATCAAAGCCTTAGATGGGAGATCTCAAGTTTCAACACCACGTTTTGGCAAAACGTTCGATGCCCCAC
CAGCCTTACCTAAAGCTACCAGAAAGGCTTTGGGAACCGTCAACAGAGCTACAGAAAAGTCTGTAAAGACCAAGGGACCC
CTCAAACAAAAACAGCCAAGCTTTTCTGCCAAAAAGATGACTGAGAAGACTGTTAAAGCAAAAAGCTCTGTTCCTGCCTC
AGATGATGCCTATCCAGAAATAGAAAAATTCTTTCCCTTCAATCCTCTAGTAACAGACTTTGAGAGTTTTGACCTGCCTG
AAGAGCACCAGATTGCGCACCTCCCCTTGAGTGGAGTGCCTCTCATGATCCTTGACGAGGAGAGAGAGCTTGAAAAGCTG
TTTCAGCTGGGCCCCCCTTCACCTGTGAAGATGCCCTCTCCACCATGGGAATCCAATCTGTTGCAGTCTCCTTCAAGCAT
TCTGTCGACCCTGGATGTTGAATTGCCACCTGTTTGCTGTGACATAGATATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 1 .73 RPM |
| SRP007412_cerebellum | 0 .79 RPM |
| SRP007412_heart | 0 .19 RPM |
| SRP007412_kidney | 0 .49 RPM |
| SRP007412_liver | 0 .53 RPM |
| SRP007412_testis | 75 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000012184 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000017264 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000009464 | ortholog_one2one | 11 retrogenes | |
| Callithrix jacchus | ENSCJAG00000019165 | ortholog_one2one | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000011971 | ortholog_one2many | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000024080 | ortholog_one2one | 4 retrogenes | |
| Dipodomys ordii | ENSDORG00000007968 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000024074 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000164611 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000011135 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000005993 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000006363 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002317 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000023077 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000013241 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004396 | ortholog_one2one | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000014877 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000012307 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000016009 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000017492 | ortholog_one2one | 4 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000015938 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000010267 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000015966 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000011570 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000009594 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_714 | 77.23 | 98.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_2022 | 89.27 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2572 | 61.60 | 60.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2573 | 61.60 | 60.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_2731 | 89.27 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000016937 retrocopies