Parental gene:

YWHAE, ENSCHOG00000010861

Aliases:None
Description:tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:scaffold_66323:556..8933(-)


>ENSCHOG00000010861
ATGGTGGAATCCATGAAGAAAGTAGCAGGGATGGGTGTGTTGACAGTTGACGAAAGAAACCTACTATCTGTAGCATATAA
AAATGTGATTGGAGCCAGAAGAGCCTCCTGGAAAATAATCAGCAGCATTGAACAGAAGGAAGAAAACAAGGGAGGAGAAG
ACGAACTAAAAATGATTTGGGAATATCGGCAAGTGGTTGAGACTGAACTAAAGTTAATCTGTTGTGACTTTCTGGATGTA
CTGGACAAACATCTCATTCCAGCAGCTAACACTGGCGAGTCCAAGGTTTTCTATTATAAAATGAAAGGAGACTACCACAG
GTATCTGGCTGAATTTGCCACAGGAAATGACAGGAAGGAGGCTGCAGAGAACAGCCTAGTGGCTTATAAAGCTGCTAGTG
ATATTGCAATGACAGAACCTCCACCAACGCATCCCATTCGCTTAGGCCTTGCTCTCGATTTTTCTGTGTTCTACTATGAA
ATCCCTAATTCCCCTGACCGTGCCTGCAGGTTGGCAAAAGCAGCTTTTGATGACGCAATTGCAGAACTGGGTACCCTGAG
TGAAGAAAGCTATAAGGACTCTGCACTTATCATGCAGTTGTTACGTGATAATCTGACACTATGGACTTCAGACATGCAGG
GTGATGGTGAAGAGCAGAATAAAGAAGCGCTGCAGGATGTGGAAGATGAAAATCAGTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005664 ortholog_one2one 3 retrogenes
retro_btau_1485, retro_btau_372, retro_btau_954,
Choloepus hoffmanni ENSCHOG00000002798 other_paralog 9 retrogenes
retro_chof_1572, retro_chof_1703, retro_chof_1890, retro_chof_2321, retro_chof_2346, retro_chof_2669, retro_chof_292, retro_chof_315, retro_chof_933,
Choloepus hoffmanni ENSCHOG00000004661 other_paralog 13 retrogenes
retro_chof_136, retro_chof_1427, retro_chof_1605, retro_chof_1835, retro_chof_2026, retro_chof_2115, retro_chof_2134, retro_chof_2233, retro_chof_429, retro_chof_481, retro_chof_489, retro_chof_527, retro_chof_863,
Choloepus hoffmanni ENSCHOG00000005782 other_paralog 15 retrogenes
retro_chof_1049, retro_chof_1325, retro_chof_1630, retro_chof_1670, retro_chof_1975, retro_chof_22, retro_chof_2221, retro_chof_2350, retro_chof_2423, retro_chof_2619, retro_chof_326, retro_chof_352, retro_chof_487, retro_chof_707, retro_chof_971,
Ciona intestinalis ENSCING00000023856 ortholog_many2many 1 retrogene
retro_cint_15,
Cavia porcellus ENSCPOG00000008007 possible_ortholog 1 retrogene
retro_cpor_307,
Ciona savignyi ENSCSAVG00000011723 ortholog_one2many 2 retrogenes
retro_csav_13, retro_csav_9,
Dasypus novemcinctus ENSDNOG00000003808 possible_ortholog 2 retrogenes
retro_dnov_1452, retro_dnov_2602,
Echinops telfairi ENSETEG00000012056 ortholog_one2one 2 retrogenes
retro_etel_1762, retro_etel_738,
Felis catus ENSFCAG00000011368 possible_ortholog 1 retrogene
retro_fcat_1636,
Homo sapiens ENSG00000108953 ortholog_one2one 4 retrogenes
retro_hsap_2324, retro_hsap_3739, retro_hsap_3851, retro_hsap_4703,
Gorilla gorilla ENSGGOG00000016840 ortholog_one2one 1 retrogene
retro_ggor_2596,
Macropus eugenii ENSMEUG00000015460 possible_ortholog 12 retrogenes
retro_meug_1290, retro_meug_1396, retro_meug_1536, retro_meug_16, retro_meug_1926, retro_meug_196, retro_meug_2153, retro_meug_2163, retro_meug_835, retro_meug_9, retro_meug_982, retro_meug_986,
Monodelphis domestica ENSMODG00000010174 ortholog_one2one 2 retrogenes
retro_mdom_1567, retro_mdom_744,
Nomascus leucogenys ENSNLEG00000000656 ortholog_one2one 2 retrogenes
retro_nleu_2067, retro_nleu_2868,
Oryctolagus cuniculus ENSOCUG00000014607 possible_ortholog 2 retrogenes
retro_ocun_1062, retro_ocun_1576,
Otolemur garnettii ENSOGAG00000006155 ortholog_one2one 2 retrogenes
retro_ogar_1003, retro_ogar_2144,
Pongo abelii ENSPPYG00000007769 ortholog_one2one 4 retrogenes
retro_pabe_1644, retro_pabe_1646, retro_pabe_2107, retro_pabe_3219,
Pan troglodytes ENSPTRG00000008521 ortholog_one2one 5 retrogenes
retro_ptro_1697, retro_ptro_2538, retro_ptro_2624, retro_ptro_2626, retro_ptro_2993,
Ictidomys tridecemlineatus ENSSTOG00000005084 ortholog_one2one 1 retrogene
retro_itri_1175,
Vicugna pacos ENSVPAG00000010288 ortholog_one2one 3 retrogenes
retro_vpac_230, retro_vpac_411, retro_vpac_559,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_905 73.91 57.76
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2. retro_chof_1912 87.45 100.00
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Download FASTA sequences of all ENSCHOG00000010861 retrocopies