RetrogeneDB ID: | retro_chof_79 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | GeneScaffold_1465:12374..12827(-) | ||
Located in intron of: | ENSCHOG00000011804 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TPMT | ||
Ensembl ID: | ENSCHOG00000008676 | ||
Aliases: | None | ||
Description: | thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:12014] |
Percent Identity: | 93.38 % |
Parental protein coverage: | 72.6 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MNDTRTLHEIKEYPDNEVQKNRVLTLEDWQGKWVSRNIAFHQEQGHQLLKKHLDTFLNGKSGLRIFFPLC |
MND..TL.EIKEYPDNEVQKN.VLTLEDWQ.KWVSRNIAFHQEQGHQLLKKHLDTFLNGKSGLRIFFP.C | |
Retrocopy | MNDISTLLEIKEYPDNEVQKNQVLTLEDWQEKWVSRNIAFHQEQGHQLLKKHLDTFLNGKSGLRIFFPVC |
Parental | GKAVEMRWFADLGHTVVGVEISELGIREFFTEQNLSYSEEPIAEIPGAKVFKSSSGNISLYCCSIFDISR |
GKAVEMRWFADLGH.VVGVEISELGI.EFFTEQNLSYSEEPIAEIPGAKVFKSSSGNISLYCCSIFD.SR | |
Retrocopy | GKAVEMRWFADLGHSVVGVEISELGI*EFFTEQNLSYSEEPIAEIPGAKVFKSSSGNISLYCCSIFDLSR |
Parental | VNIGKFDRIWD |
VNIGKFDRIW. | |
Retrocopy | VNIGKFDRIWN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |