RetrogeneDB ID: | retro_dord_645 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_46915:8380..8725(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Gcsh | ||
Ensembl ID: | ENSDORG00000007831 | ||
Aliases: | None | ||
Description: | glycine cleavage system protein H (aminomethyl carrier) [Source:MGI Symbol;Acc:MGI:1915383] |
Percent Identity: | 60. % |
Parental protein coverage: | 65.9 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | RTGPALLSVRKFTEKHEWIMTENGIGTVGISNFAQEALGDVVYCSLPEIGTKLKKQDEFGALESVKAASE |
RT..A.LS......K....MTEN.I....I.NF.QEALGDVV..SL.E..TK.KKQDEFGALESV..ASE | |
Retrocopy | RTSCAALSA*IHRDKMNKLMTENRIRIIKINNFSQEALGDVVCYSLTEVVTKVKKQDEFGALESVRSASE |
Parental | LYSPLSGEVTAVNE-ALAENPGLVNKSCYEDGWLIKMTLSNPSEL |
.Y.PLS.EV...NE.A.AE..GL..KSCYE..WL.KMT..N.SEL | |
Retrocopy | FYFPLSREVAVINEKAVAEILGLADKSCYENHWLMKMTVCNSSEL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |