RetrogeneDB - Parental gene ENSCHOG00000002434 details

                            
>ENSCHOG00000002434
ATGGCGCTGCGCGCGGCACGGAGTGTGCGGATCGTCGTCTGCAGCCTGCGCGCGGCCTCGGCGCCCGCCACGTCCTGCCC

GCGGCGGCCCTGGGGGCTGGGGACTGGCGCTGTTCGGACGCTGCGCACCGGCCCCGCTCTGCTCTCGGTGCGGAAATTCA

CAGACAAACATGAATGGATAACAACAGAAAATGGTATTGGAACAGTGGGAATCAGCAATTTTGCACAGGAAGCTTTGGGA

AATGTTGTTTACTGTAGTCTTCCCGAGGTTGGGACAAAATTGAACAAACAAGAGGAGTTTGGTGCTTTGGAAAGTGTGAA

AGCTGCTAGTGAACTTTATTCTCCTCTGTCAGGAGAAGTAACAGAAATTAATGAAGCTCTTGCAGAGAATCCAGGACTTG

TCAACAAATCTTGTTATGAAGATGGTTGGCTGATCAAGATGACACTGAGTAATCCTTCAGAACTTGATGAACTAATGAGT

GAAGAAGCATATGAGAAATATATAAAATCTATTGAAGAGTGA

Species	Parental gene accession	Homology type	Retrogenes number
Anolis carolinensis	ENSACAG00000008905	ortholog_one2one	1 retrogene	retro_acar_75,
Ailuropoda melanoleuca	ENSAMEG00000013959	ortholog_one2one	5 retrogenes	retro_amel_1362, retro_amel_1877, retro_amel_229, retro_amel_432, retro_amel_80,
Bos taurus	ENSBTAG00000006795	ortholog_one2many	8 retrogenes	retro_btau_1128, retro_btau_12, retro_btau_1483, retro_btau_1543, retro_btau_1628, retro_btau_246, retro_btau_265, retro_btau_94,
Canis familiaris	ENSCAFG00000020014	ortholog_one2one	5 retrogenes	retro_cfam_1249, retro_cfam_1543, retro_cfam_358, retro_cfam_618, retro_cfam_732,
Callithrix jacchus	ENSCJAG00000016654	ortholog_one2one	8 retrogenes	retro_cjac_1071, retro_cjac_1576, retro_cjac_1674, retro_cjac_1804, retro_cjac_2650, retro_cjac_3280, retro_cjac_3470, retro_cjac_552,
Cavia porcellus	ENSCPOG00000009983	ortholog_one2one	3 retrogenes	retro_cpor_1240, retro_cpor_385, retro_cpor_463,
Dipodomys ordii	ENSDORG00000007831	ortholog_one2one	1 retrogene	retro_dord_645,
Erinaceus europaeus	ENSEEUG00000009653	ortholog_one2one	2 retrogenes	retro_eeur_189, retro_eeur_231,
Felis catus	ENSFCAG00000013038	ortholog_one2many	8 retrogenes	retro_fcat_1007, retro_fcat_1112, retro_fcat_1294, retro_fcat_1435, retro_fcat_1627, retro_fcat_1920, retro_fcat_215, retro_fcat_354,
Homo sapiens	ENSG00000140905	ortholog_one2one	10 retrogenes	retro_hsap_1079, retro_hsap_1380, retro_hsap_2376, retro_hsap_275, retro_hsap_3308, retro_hsap_3389, retro_hsap_3742, retro_hsap_3837, retro_hsap_4125, retro_hsap_465,
Gorilla gorilla	ENSGGOG00000000232	ortholog_one2one	10 retrogenes	retro_ggor_1073, retro_ggor_1306, retro_ggor_1459, retro_ggor_1742, retro_ggor_1802, retro_ggor_2295, retro_ggor_2584, retro_ggor_2772, retro_ggor_320, retro_ggor_853,
Loxodonta africana	ENSLAFG00000015586	ortholog_one2one	3 retrogenes	retro_lafr_554, retro_lafr_822, retro_lafr_900,
Myotis lucifugus	ENSMLUG00000005783	ortholog_one2one	12 retrogenes	retro_mluc_1151, retro_mluc_1221, retro_mluc_1466, retro_mluc_1538, retro_mluc_1659, retro_mluc_1685, retro_mluc_2089, retro_mluc_2090, retro_mluc_2139, retro_mluc_2314, retro_mluc_2411, retro_mluc_709,
Macaca mulatta	ENSMMUG00000013088	ortholog_one2many	5 retrogenes	retro_mmul_1192, retro_mmul_2202, retro_mmul_661, retro_mmul_840, retro_mmul_960,
Mustela putorius furo	ENSMPUG00000009677	ortholog_one2one	4 retrogenes	retro_mputfur_1434, retro_mputfur_1492, retro_mputfur_349, retro_mputfur_809,
Mus musculus	ENSMUSG00000034424	ortholog_one2one	8 retrogenes	retro_mmus_1880, retro_mmus_2144, retro_mmus_2235, retro_mmus_3062, retro_mmus_3303, retro_mmus_3459, retro_mmus_3610, retro_mmus_3703,
Nomascus leucogenys	ENSNLEG00000026844	possible_ortholog	1 retrogene	retro_nleu_365,
Ochotona princeps	ENSOPRG00000003281	ortholog_one2one	1 retrogene	retro_opri_790,
Procavia capensis	ENSPCAG00000005820	ortholog_one2one	1 retrogene	retro_pcap_207,
Pongo abelii	ENSPPYG00000007585	ortholog_one2one	15 retrogenes	retro_pabe_1146, retro_pabe_1147, retro_pabe_2146, retro_pabe_2728, retro_pabe_2785, retro_pabe_3060, retro_pabe_3121, retro_pabe_3288, retro_pabe_3289, retro_pabe_3479, retro_pabe_392, retro_pabe_393, retro_pabe_675, retro_pabe_676, retro_pabe_899,
Pan troglodytes	ENSPTRG00000008386	ortholog_one2one	10 retrogenes	retro_ptro_1738, retro_ptro_2163, retro_ptro_230, retro_ptro_2304, retro_ptro_2381, retro_ptro_2540, retro_ptro_2613, retro_ptro_2802, retro_ptro_2803, retro_ptro_734,
Pteropus vampyrus	ENSPVAG00000009956	ortholog_one2one	8 retrogenes	retro_pvam_1253, retro_pvam_1474, retro_pvam_1481, retro_pvam_194, retro_pvam_552, retro_pvam_583, retro_pvam_78, retro_pvam_958,
Rattus norvegicus	ENSRNOG00000011535	ortholog_one2one	6 retrogenes	retro_rnor_1217, retro_rnor_1218, retro_rnor_1400, retro_rnor_1910, retro_rnor_2691, retro_rnor_557,
Sarcophilus harrisii	ENSSHAG00000005529	ortholog_one2one	1 retrogene	retro_shar_239,
Ictidomys tridecemlineatus	ENSSTOG00000016433	ortholog_one2many	2 retrogenes	retro_itri_31, retro_itri_34,
Tupaia belangeri	ENSTBEG00000000056	ortholog_one2many	27 retrogenes	retro_tbel_1426, retro_tbel_1716, retro_tbel_1766, retro_tbel_1846, retro_tbel_1923, retro_tbel_2026, retro_tbel_2074, retro_tbel_2168, retro_tbel_2315, retro_tbel_2426, retro_tbel_2489, retro_tbel_2515, retro_tbel_2573, retro_tbel_2769, retro_tbel_3007, retro_tbel_3025, retro_tbel_311, retro_tbel_3140, retro_tbel_3458, retro_tbel_3852, retro_tbel_3924, retro_tbel_4173, retro_tbel_4727, retro_tbel_597, retro_tbel_601, retro_tbel_609, retro_tbel_825,
Tarsius syrichta	ENSTSYG00000000248	ortholog_one2one	13 retrogenes	retro_tsyr_119, retro_tsyr_1311, retro_tsyr_1367, retro_tsyr_1833, retro_tsyr_2023, retro_tsyr_2173, retro_tsyr_309, retro_tsyr_328, retro_tsyr_363, retro_tsyr_429, retro_tsyr_439, retro_tsyr_587, retro_tsyr_643,
Tursiops truncatus	ENSTTRG00000007992	ortholog_one2one	8 retrogenes	retro_ttru_1052, retro_ttru_128, retro_ttru_1415, retro_ttru_1458, retro_ttru_1778, retro_ttru_211, retro_ttru_310, retro_ttru_795,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_chof_163	58.95	53.76	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_chof_178	93.68	100.00	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_chof_219	69.57	90.75	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_chof_283	71.43	70.52	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_chof_335	55.96	61.27	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_chof_361	71.57	58.38	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_chof_362	60.22	52.60	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_chof_363	62.90	69.94	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_chof_419	82.40	71.68	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_chof_433	54.00	56.07	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_chof_477	66.36	60.69	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_chof_597	80.22	52.60	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_chof_755	88.14	68.21	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_chof_931	79.88	94.80	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_chof_1011	78.38	85.55	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_chof_1019	76.72	66.47	Please wait, loading	Please wait, loading	Please wait, loading
17.	retro_chof_1123	62.96	77.46	Please wait, loading	Please wait, loading	Please wait, loading
18.	retro_chof_1213	79.38	56.07	Please wait, loading	Please wait, loading	Please wait, loading
19.	retro_chof_1324	76.72	66.47	Please wait, loading	Please wait, loading	Please wait, loading
20.	retro_chof_1410	95.95	100.00	Please wait, loading	Please wait, loading	Please wait, loading
21.	retro_chof_1482	77.93	82.08	Please wait, loading	Please wait, loading	Please wait, loading
22.	retro_chof_1550	84.17	68.21	Please wait, loading	Please wait, loading	Please wait, loading
23.	retro_chof_1647	77.03	84.97	Please wait, loading	Please wait, loading	Please wait, loading
24.	retro_chof_1659	81.91	53.76	Please wait, loading	Please wait, loading	Please wait, loading
25.	retro_chof_1690	59.82	63.58	Please wait, loading	Please wait, loading	Please wait, loading
26.	retro_chof_1705	78.46	74.57	Please wait, loading	Please wait, loading	Please wait, loading
27.	retro_chof_1722	78.38	85.55	Please wait, loading	Please wait, loading	Please wait, loading
28.	retro_chof_1781	72.00	56.65	Please wait, loading	Please wait, loading	Please wait, loading
29.	retro_chof_1787	80.45	76.30	Please wait, loading	Please wait, loading	Please wait, loading
30.	retro_chof_2264	77.14	100.00	Please wait, loading	Please wait, loading	Please wait, loading
31.	retro_chof_2289	72.15	90.75	Please wait, loading	Please wait, loading	Please wait, loading
32.	retro_chof_2319	83.33	76.30	Please wait, loading	Please wait, loading	Please wait, loading
33.	retro_chof_2412	87.72	65.90	Please wait, loading	Please wait, loading	Please wait, loading
34.	retro_chof_2466	67.48	68.79	Please wait, loading	Please wait, loading	Please wait, loading
35.	retro_chof_2494	66.98	59.54	Please wait, loading	Please wait, loading	Please wait, loading
36.	retro_chof_2632	78.72	81.50	Please wait, loading	Please wait, loading	Please wait, loading
37.	retro_chof_2657	83.33	65.90	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSCHOG00000002434 retrocopies

Parental gene:	GCSH, ENSCHOG00000002434
Aliases:	None
Description:	glycine cleavage system protein H (aminomethyl carrier) [Source:HGNC Symbol;Acc:4208]
Organism:	*Sloth (Choloepus hoffmanni)*
Coordinates:	GeneScaffold_4065:3335..12778(-)

Parental gene:

GCSH, ENSCHOG00000002434