RetrogeneDB ID: | retro_tsyr_1367 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_414774:429..691(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GCSH | ||
Ensembl ID: | ENSTSYG00000000248 | ||
Aliases: | None | ||
Description: | glycine cleavage system protein H (aminomethyl carrier) [Source:HGNC Symbol;Acc:4208] |
Percent Identity: | 71.59 % |
Parental protein coverage: | 50.88 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | AASSGPTAPCPPRPWGPGTGVWTL-CMGPALLSVRKFTEKHEWITTENGIGTVGISNFAQEALGDVVYCS |
A.S.GP..PCPPRPWGPGTG.....C.G....S.....EKHEWI.TENGIG.V.ISNFAQEALGDVVY.. | |
Retrocopy | ACSLGPASPCPPRPWGPGTGAIQM>CTGHLPCSRCVNSEKHEWIATENGIGAVEISNFAQEALGDVVYSR |
Parental | LPEVGTKLNKQDEFGALE |
LPEVGTKLNKQDE.GALE | |
Retrocopy | LPEVGTKLNKQDEYGALE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |