RetrogeneDB ID: | retro_mluc_2602 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL431475:41393..41877(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3 | ||
Ensembl ID: | ENSMLUG00000012912 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.27 % |
Parental protein coverage: | 79.61 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 5 |
Parental | PQMKETIMNQEKLAKLQAQVRIGGKG-TARRKKKVVHRTATADDK-KLQFSLKKLGV-NNISGIEEVNMF |
P.............KLQAQVR.GGK..T.RRKKK.VHRTA.ADDK.KLQF..KKLGV.NN.SGIEEVNMF | |
Retrocopy | PTR*KELSGTKRNTKLQAQVRPGGKK<TGRRKKKAVHRTAIADDK<KLQF*-KKLGV<NNTSGIEEVNMF |
Parental | TNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSI-LNQLGADSLTSLRRLAEALPKQSVDGKA |
TNQG.VIHF..PKVQAS.AANT...TG.AET.Q.TE.LPS....Q.GA..L..LRRLA.A..KQSVDGK. | |
Retrocopy | TNQGAVIHFSSPKVQASPAANTCMVTGSAETQQGTEALPST<ADQHGAFGLPALRRLAKAGSKQSVDGKV |
Parental | PL-ATGEDDDDEVPGIQENFDEASKNEAN |
PL..T..DDDD.VP...ENFDE.SKNEAN | |
Retrocopy | PL<VTRGDDDDQVPDLVENFDETSKNEAN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |