RetrogeneDB ID: | retro_mputfur_1576 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897271.1:642108..642637(+) | ||
Located in intron of: | ENSMPUG00000012326 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3 | ||
Ensembl ID: | ENSMPUG00000005864 | ||
Aliases: | None | ||
Description: | basic transcription factor 3 [Source:HGNC Symbol;Acc:1125] |
Percent Identity: | 78.69 % |
Parental protein coverage: | 85.92 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 6 |
Parental | SLPPPRGGTRGQ-EPQMKETIMNQEKLAKLQAQVRIGGKGTARRKKKV-VHRTATADD-KKLQFSLKKLG |
SLPPP.G.T.GQ.EPQMKETIMNQEKL.KLQAQ.RIGGKG.....KKV.V.RTATAD..KKLQF.LKKL. | |
Retrocopy | SLPPPHGRTPGQ<EPQMKETIMNQEKLTKLQAQERIGGKGITSQNKKV<VYRTATADG>KKLQFALKKLA |
Parental | VNNISGIEEVNMFTNQGTVI-HFNNPKVQASLAANTFTITGHAETKQL-TEMLPSILNQLGADSLTSLRR |
VNNIS.IEEVNM.TNQGTVI.HFNN.KVQA.L...TFTI.GHA.TKQL..E.LP.ILNQL..D.LTSLRR | |
Retrocopy | VNNISDIEEVNMSTNQGTVI<HFNNSKVQALLVLKTFTILGHADTKQL<DEVLPNILNQLDVDNLTSLRR |
Parental | LAEALPKQ-SVDGKAPLATGEDDDDEVPDLVENFDEASKNEAN |
LAEALPKQ.SVDGK.PLAT.EDDD.EVPDLVENF.EASKNEAN | |
Retrocopy | LAEALPKQ>SVDGKIPLAT*EDDDNEVPDLVENFNEASKNEAN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |