RetrogeneDB ID: | retro_mmur_1060 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_18321:5731..6246(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TPT1 | ||
Ensembl ID: | ENSMICG00000002027 | ||
Aliases: | None | ||
Description: | tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:12022] |
Percent Identity: | 94.8 % |
Parental protein coverage: | 93.99 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGV |
MIIYRDLISHDEMFSDIYK.REIA.GLCLEVEGKMVSRTEGNIDDSLIGGNASAEG.EGE.TESTVITGV | |
Retrocopy | MIIYRDLISHDEMFSDIYKFREIAGGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGSEGESTESTVITGV |
Parental | DIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENM |
DIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGA.EQIKHILANFKNYQFFIGENM | |
Retrocopy | DIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGATEQIKHILANFKNYQFFIGENM |
Parental | NPDGMVALLDY-REDGVTPYMIFFKDGLEMEKC |
NPDGMVALLD...EDGVTPYM.FFKDGLEMEKC | |
Retrocopy | NPDGMVALLDH<PEDGVTPYMVFFKDGLEMEKC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |