RetrogeneDB ID: | retro_mputfur_870 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896962.1:4566107..4566621(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMPUG00000010116 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TPT1 | ||
Ensembl ID: | ENSMPUG00000001640 | ||
Aliases: | None | ||
Description: | tumor protein, translationally-controlled 1 [Source:HGNC Symbol;Acc:12022] |
Percent Identity: | 78.16 % |
Parental protein coverage: | 98.29 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEG-PEGEGTESTVITG |
MIIY.DLISH.EMFSDIYKI.EIA.GLC.EVE.K.VSRTEGN.DD.LIGGNA...G.PEG..TE.TVI.G | |
Retrocopy | MIIYWDLISHNEMFSDIYKIWEIAGGLCHEVEVKVVSRTEGNTDDLLIGGNAFIDG<PEGKDTEITVIPG |
Parental | V-DIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGE |
V..IVMNH.LQETSFTKEA.KKYIKDYMKSIKGKLEEQ.PERV.PFMTGAAE.IKHI.AN.KN..FFIG. | |
Retrocopy | V<AIVMNHRLQETSFTKEACKKYIKDYMKSIKGKLEEQSPERVNPFMTGAAEHIKHIFANLKNCKFFIGK |
Parental | NMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC |
NMNPDG..ALLDY.E.G.T.Y.I..KDGLEMEKC | |
Retrocopy | NMNPDGLAALLDYHEGGMTLYRILVKDGLEMEKC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |