RetrogeneDB ID: | retro_mputfur_1233 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897049.1:3302301..3302650(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPC | ||
Ensembl ID: | ENSMPUG00000003210 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide C [Source:HGNC Symbol;Acc:11157] |
Percent Identity: | 75.21 % |
Parental protein coverage: | 74.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MEEQAQSLIDKTTAAFQQGKIPPTPFSAPPPAG-AMIPP-PPSLPGPPRPGMMPAPHMGGPPMMPMMGPP |
.EEQAQ...DKTTAAFQQ...PPTPFSAP.PAG.AMIPP.PPSLP.PPRPGM.P.PH.GGPPMMP.M... | |
Retrocopy | VEEQAQRGMDKTTAAFQQEEVPPTPFSAPLPAG<AMIPPHPPSLPAPPRPGMRPEPHRGGPPMMPVMDT- |
Parental | PPG-MMPVGPAPGMRPPMGGHMPMMPGPPMMRPPARPMMVPTRPGMTRPDR |
.PG.M.PV.PA.GMRPPMGGHMPMMPGPP.MRPP..P.MV.T.PGMT.PDR | |
Retrocopy | -PG<MIPVAPASGMRPPMGGHMPMMPGPPKMRPPSHPVMVSTQPGMTLPDR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |