RetrogeneDB ID: | retro_mputfur_374 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896905.1:12347728..12348197(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPC | ||
Ensembl ID: | ENSMPUG00000003210 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide C [Source:HGNC Symbol;Acc:11157] |
Percent Identity: | 71.34 % |
Parental protein coverage: | 98.11 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | FYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKIPPTPFSAPPPA |
F.CDYC.TY.THD.P.VRK.HCS..KHK.NVKD.YQK.MEEQAQSLI.KTT.A.QQG.I.PT.F..PPP. | |
Retrocopy | FHCDYCNTYFTHDTPAVRKIHCSSWKHKKNVKDCYQKCMEEQAQSLINKTTTALQQG*ITPTAFFVPPPP |
Parental | GAMIPPPPSLPGPPRPGMMPAPHMGGPPMMPMMGPPPPGMMPVGPAPGMRPPMGGHMPMMPGPPM-MRPP |
.AMIPPP...P.P...GMMP.PHM.GPPMMP.MGPPPPGMMP..PAPGMRPP...HMPMMP.PP..MR.. | |
Retrocopy | EAMIPPPHQSPDPHCLGMMPTPHMEGPPMMPVMGPPPPGMMPLAPAPGMRPPIDSHMPMMPVPPV>MRLL |
Parental | ARPMMVPTRPGMTRPDR |
A.P.MVP..PGMTRPDR | |
Retrocopy | ACPLMVPNQPGMTRPDR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |