RetrogeneDB ID: | retro_ogar_1757 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873564.1:8146796..8147743(+) | ||
Located in intron of: | ENSOGAG00000006736 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000027672 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.17 % |
Parental protein coverage: | 65.97 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | AIPAFISLLCGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPN |
AIP...SL.CGYL.NL.WTLSNLC.NKNPAPPLDAVEQILPT.VRLLHHDDPEVLADTCWAI.YLTDGPN | |
Retrocopy | AIPDMSSLSCGYLGNLSWTLSNLCHNKNPAPPLDAVEQILPTSVRLLHHDDPEVLADTCWAIFYLTDGPN |
Parental | ERIEMVVKTGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQVVIDAGALTVFPSLLTNPKTNIQK |
ERIEMVVKTGVVPQLVKLLGATELPIVTPA.RAIGNIVTGTDE...VVIDAGALTVFPSLLTNP.TNIQK | |
Retrocopy | ERIEMVVKTGVVPQLVKLLGATELPIVTPA*RAIGNIVTGTDEYA*VVIDAGALTVFPSLLTNPQTNIQK |
Parental | EATWTMSNITAGRQDQIQQVVNHGLVPLLVGVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIE |
EATWTMSNITAG.QDQIQQVVNHGLVPLLVGVLS.ADFKTQKEAVWAVT.YTSGGTVEQI.YLVHCGIIE | |
Retrocopy | EATWTMSNITAGHQDQIQQVVNHGLVPLLVGVLSEADFKTQKEAVWAVTSYTSGGTVEQIIYLVHCGIIE |
Parental | PLSEPLKLLVFKLIISSIDIYLLKVEAAEKLGETEKLSIMIEECGSADKIEALQNHENESAYKASLN-LI |
PL...L.....K.I....D.......AAEKLGETEKLS.MIE.CG..DKIEALQNHENES.YKASLN.LI | |
Retrocopy | PLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSMMIEDCGGLDKIEALQNHENESVYKASLN<LI |
Parental | EKYFSVEEEEDQNVVPETTSEGYTFQVQDETPGTFNF |
EKYFSVEEEEDQNVVPETTSEG.TFQVQD.TPG.FNF | |
Retrocopy | EKYFSVEEEEDQNVVPETTSEGCTFQVQDGTPGPFNF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |