RetrogeneDB ID: | retro_pvam_1159 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_3354:6094..6396(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSPVAG00000017850 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 68.63 % |
Parental protein coverage: | 74.81 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MGAIAKPDCIITSDGQNLTIKSESTLKTTQFSCKLGEKFEETTADGRKTQTVCSF-VNGALVQHQEWDGK |
MGA.AKPDC.ITSD..N..IK.E..LKT..FSC.L..KFE...A.GRKTQTVC....NGAL.QH.EWDGK | |
Retrocopy | MGAMAKPDCVITSDSKNRSIKTERNLKTRRFSCNLSKKFEQIIANGRKTQTVCKL<INGALIQH*EWDGK |
Parental | ESTITRKLEDGKMVVECVMNDVTCTRIYEKVE |
EST.TRKLE.GK.VVECV.N.VTCT..YE.VE | |
Retrocopy | ESTVTRKLEVGKLVVECVVNSVTCTQVYETVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |