RetrogeneDB ID: | retro_ttru_83 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1177:132842..133509(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C14orf166 | ||
Ensembl ID: | ENSTTRG00000005721 | ||
Aliases: | None | ||
Description: | chromosome 14 open reading frame 166 [Source:HGNC Symbol;Acc:23169] |
Percent Identity: | 73.13 % |
Parental protein coverage: | 92.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | KDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKYLRDVNCPFKIQDRPEAIDWLLGLAVR |
.DET..RN.....EDQK.R.YK.EDRG.LRNI.SSD.PKFFEKYLRDVNC.FKIQD..EAIDWLLGLAV. | |
Retrocopy | RDETKLRNDVC-TEDQKRRYYKTEDRGKLRNIQSSDQPKFFEKYLRDVNCSFKIQDGQEAIDWLLGLAVS |
Parental | LEYGDNAEKYKDLVPDNTKNADNAAKNAEPLINLDVNNPDFKAGVMALANLLQIQ-RHDDYLVMLKAIRI |
LEYGDNAEKYKD.VPDN..NADNA..NAEP.INLDV.NP.F.AGVM..AN.LQ.Q..H..YL..L.AIRI | |
Retrocopy | LEYGDNAEKYKDQVPDNAQNADNATENAEPGINLDVTNPNFRAGVMVQAN-LQSQ<AHGGYLAVLQAIRI |
Parental | LVQE-RLTQDAVAKANQTKEGLPVALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQ |
LVQE..LT.D..A......EGLPV.LDK.ILGFDT.D.VLNEA.QIL.LLH.EELRELQTKIN.A.VAVQ | |
Retrocopy | LVQE<ALTRDVAASTHPAEEGLPVGLDKYILGFDTRDVVLNEAGQILHLLHVEELRELQTKINAARVAVQ |
Parental | AIIADPKTDHRLGKVGR |
.I.ADPKTDHRL.KVGR | |
Retrocopy | VITADPKTDHRLEKVGR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |