RetrogeneDB ID: | retro_ttru_892 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_537:50560..50955(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RAN | ||
Ensembl ID: | ENSTTRG00000012732 | ||
Aliases: | None | ||
Description: | RAN, member RAS oncogene family [Source:HGNC Symbol;Acc:9846] |
Percent Identity: | 70.71 % |
Parental protein coverage: | 59.31 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | SIAMAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTA |
.I.M.AQGEPQVQFKL.LVGDG.TGKT.F.K..LTG.FE.....TLGVEVHPLVFHT.R..IKFNVW... | |
Retrocopy | NITMTAQGEPQVQFKLILVGDGVTGKTIFMKHPLTGKFEN----TLGVEVHPLVFHTSR*SIKFNVWSVC |
Parental | GQEKFGGLRDGYYIQAQCA-IIMFDVTSRVT-YKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRKVKAK |
.Q.KFGGLRDGYYI.AQCA.IIM.DVTSRVT..KNV.N...DL...C..N.P.VLCGNKVDIKDRK.K.K | |
Retrocopy | -QKKFGGLRDGYYI*AQCA<IIMLDVTSRVT>NKNVLNCNGDLIGACK<NTPTVLCGNKVDIKDRKGKTK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |