RetrogeneDB ID: | retro_etel_1896 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_312318:78626..79022(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000011875 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.55 % |
Parental protein coverage: | 99.25 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | QCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAK |
QCA.IMF.VT.RVTYKNVP.NWHRDLV.VCENIPIVLCGNKVDIKD.KVKAKSIVFH.KKNLQ.Y.I.AK | |
Retrocopy | QCAVIMFEVTRRVTYKNVP>NWHRDLVQVCENIPIVLCGNKVDIKDGKVKAKSIVFHQKKNLQSYAIAAK |
Parental | SNYNFEKPFL-WLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDD |
S.YNFEKPFL.WLARKLIGDPNLEFVAMPA.APPEVVMDPA.AAQYEHDLEVAQTTALPDEDDD | |
Retrocopy | SHYNFEKPFL<WLARKLIGDPNLEFVAMPAPAPPEVVMDPAVAAQYEHDLEVAQTTALPDEDDD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |