RetrogeneDB ID: | retro_etel_412 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6876:103835..104225(-) | ||
Located in intron of: | ENSETEG00000001142 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000011875 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 79.23 % |
Parental protein coverage: | 97.74 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | QCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKS |
QCAI.MFDVT..V.YKNVP.WHRD.VRVC.NIPIVLCGNKV.IKDRKVKA.SIVFHR.KNLQY..ISA.S | |
Retrocopy | QCAIVMFDVTPKVAYKNVPDWHRDPVRVCDNIPIVLCGNKVGIKDRKVKATSIVFHRNKNLQYCAISATS |
Parental | NYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDED |
.....KPFL.LA..L.GDPNL.FVA.PALAPPEVV.DPALAAQ.EHDLEVAQT.ALPDED | |
Retrocopy | HCHSDKPFLGLAGTLTGDPNLGFVATPALAPPEVVRDPALAAQ*EHDLEVAQTAALPDED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |