RetrogeneDB ID: | retro_etel_1878 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_310458:57860..58187(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000011875 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.07 % |
Parental protein coverage: | 85.71 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 3 |
Parental | NWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDP |
NWHR.LV.VCENIPI.LCGNKVDIKDRKVK.KS..FH.KKNLQYYDISA.SNYN..KPFL.LARKLIG.P | |
Retrocopy | NWHRNLV*VCENIPILLCGNKVDIKDRKVKEKSTTFH*KKNLQYYDISAQSNYNLGKPFL*LARKLIGGP |
Parental | N-LEFVAMPALAPPEVVMDPALAAQYEHD-LEVAQTTAL-PDEDDDL |
N.LEF....ALAPPEVV.DP.LA.Q.EHD.LE...TTAL.PDE.D.L | |
Retrocopy | N<LEF----ALAPPEVVLDPPLAVQWEHD<LELVLTTAL<PDEEDGL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |